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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-UBASH3A-8:3 | LUAD | 8 | 0.197413 | noncoding | 50 | chr21 | 42461407 | 42470557 | + | 0.9996 | lnc-UBASH3A-8 | 0.029 | 0 | 0 | 0 | 2 | noncoding | -0.30022382 | VEYQGLFK | n[230]VEYQGLFK | LKLRVEYQGLFKTNKQYSNFSSRTQLRKQQQFVVEPQIKQNLASDKGQKM |
lnc-UBASH3B-2:3 | PRAD | 30 | 0.271439 | noncoding | 67 | chr11 | 122141152 | 122363762 | + | 0.1038 | lnc-UBASH3B-2 | 1 | -2.74 | -4.291 | -2.518 | 1 | noncoding | -0.335730118 | MNTLMFISLMATSSFTSQNHSSISVCGIDK | M[147]NTLM[147]FISLM[147]ATSSFTSQNHSSISVCGIDK | MNTLMFISLMATSSFTSQNHSSISVCGIDKSYAKFPFNFLRHCQTVFQSGCFILHSHQQQMKASIDF |
lnc-UBASH3B-2:3 | PRAD | 29 | 0.271439 | noncoding | 67 | chr11 | 122141152 | 122363762 | + | 0.8912 | lnc-UBASH3B-2 | 1 | -2.74 | -4.291 | -2.518 | 1 | noncoding | -0.335730118 | NTLMFISLMATSSFTSQNHSSISVCGIDK | NTLM[147]FISLMATSSFTSQNHSSISVCGIDK | MNTLMFISLMATSSFTSQNHSSISVCGIDKSYAKFPFNFLRHCQTVFQSGCFILHSHQQQMKASIDF |
lnc-TUSC3-5:1 | BRCA-HER2-enriched | 7 | 0.0827108 | noncoding | 92 | chr8 | 16374617 | 16375082 | + | 0.9956 | lnc-TUSC3-5 | 1 | 0 | 0 | 0 | 14 | noncoding | -0.334584969 | KAWLLKK | n[145]KAWLLKK | MNIISVLVTGSLSKTPIQPALLSAALSDIQHPCLQPVGSAEDHIWAPQKNVEDFLSPLLAKTCITQAKELTGTLQVKGYFDQQRKAWLLKKG |
lnc-TUSC3-5:1 | BRCA-Basal-like | 7 | 0.0827108 | noncoding | 92 | chr8 | 16374617 | 16375082 | + | 0.9956 | lnc-TUSC3-5 | 1 | 0 | 0 | 0 | 14 | noncoding | -0.334584969 | KAWLLKK | n[145]KAWLLKK | MNIISVLVTGSLSKTPIQPALLSAALSDIQHPCLQPVGSAEDHIWAPQKNVEDFLSPLLAKTCITQAKELTGTLQVKGYFDQQRKAWLLKKG |
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