top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-UBASH3B-2:3
Chromosome
chr11
Gene Name
lnc-UBASH3B-2
Start
122141152
CPC Label
noncoding
End
122363762
Cancer
PRAD
Strand
+
Peptide
MNTLMFISLMATSSFTSQNHSSISVCGIDK
Modified Peptide
M[147]NTLM[147]FISLM[147]ATSSFTSQNHSSISVCGIDK
Peptide Length
30
ORF Length
67
Open Reading Frame (ORF)
MNTLMFISLMATSSFTSQNHSSISVCGIDKSYAKFPFNFLRHCQTVFQSGCFILHSHQQQMKASIDF
Conservation Score
1
PhyloCSF Frame 1
-2.74
No. of Spectra
1
CPC Coding Probability
0.271439
PhyloCSF Frame 2
-4.291
CNTI Index
noncoding
Max Probability
0.1038
PhyloCSF Frame 3
-2.518
CNTI Score
-0.335730118
bottom of page