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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-USP48-4:1 | BRCA-Luminal B | 14 | 0.00848674 | noncoding | 127 | chr1 | 21622922 | 21669283 | - | 0.9999 | lnc-USP48-4 | 1 | -1.517 | -4.024 | -0.732 | 3 | noncoding | -0.333025686 | VNLVPSYTPSLYPK | n[145]VNLVPSYTPSLYPK | LGFGASCGAPGLGEETLCTHTCTHTQSPEVNTSANRGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRVNLVPSYTPSLYPKLFHLLEPASHLYNGDDICT |
lnc-USP48-4:1 | BRCA-Luminal A | 14 | 0.00848674 | noncoding | 127 | chr1 | 21622922 | 21669283 | - | 0.9999 | lnc-USP48-4 | 1 | -1.517 | -4.024 | -0.732 | 3 | noncoding | -0.333025686 | VNLVPSYTPSLYPK | n[145]VNLVPSYTPSLYPK | LGFGASCGAPGLGEETLCTHTCTHTQSPEVNTSANRGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRVNLVPSYTPSLYPKLFHLLEPASHLYNGDDICT |
lnc-USP48-4:1 | CCRC | 14 | 0.00848674 | noncoding | 127 | chr1 | 21622922 | 21669283 | - | 1 | lnc-USP48-4 | 1 | -1.517 | -4.024 | -0.732 | 21 | noncoding | -0.333025686 | VNLVPSYTPSLYPK | n[230]VNLVPSYTPSLYPK | LGFGASCGAPGLGEETLCTHTCTHTQSPEVNTSANRGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRVNLVPSYTPSLYPKLFHLLEPASHLYNGDDICT |
lnc-USP48-4:1 | EOGC | 14 | 0.00848674 | noncoding | 127 | chr1 | 21622922 | 21669283 | - | 0.9999 | lnc-USP48-4 | 1 | -1.517 | -4.024 | -0.732 | 5 | noncoding | -0.333025686 | VNLVPSYTPSLYPK | n[145]VNLVPSYTPSLYPK | LGFGASCGAPGLGEETLCTHTCTHTQSPEVNTSANRGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRVNLVPSYTPSLYPKLFHLLEPASHLYNGDDICT |
lnc-USP53-1:1 | OV | 8 | 0.0579722 | noncoding | 38 | chr4 | 119212586 | 119221495 | + | 0.8497 | lnc-USP53-1 | 0.995 | 0 | 0 | 0 | 1 | coding | 0.58337171 | DSLIVLSR | n[145]DSLIVLSR | LGLSFGRRKDSLIVLSRVMKESGPGILPFRIKLLLVKH |
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