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McDonnell Genome Institute
Washington University
Transcript
lnc-USP48-4:1
Chromosome
chr1
Gene Name
lnc-USP48-4
Start
21622922
CPC Label
noncoding
End
21669283
Cancer
BRCA-Luminal B
Strand
-
Peptide
VNLVPSYTPSLYPK
Modified Peptide
n[145]VNLVPSYTPSLYPK
Peptide Length
14
ORF Length
127
Open Reading Frame (ORF)
LGFGASCGAPGLGEETLCTHTCTHTQSPEVNTSANRGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRVNLVPSYTPSLYPKLFHLLEPASHLYNGDDICT
Conservation Score
1
PhyloCSF Frame 1
-1.517
No. of Spectra
3
CPC Coding Probability
0.00848674
PhyloCSF Frame 2
-4.024
CNTI Index
noncoding
Max Probability
0.9999
PhyloCSF Frame 3
-0.732
CNTI Score
-0.333025686
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