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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VGLL4-9:3 | OV | 9 | 0.0783645 | noncoding | 33 | chr3 | 11202469 | 11225918 | - | 0.9423 | lnc-VGLL4-9 | 0.084 | 0 | 0 | 0 | 1 | noncoding | -0.32857367 | GQSQYNGEK | n[145]GQSQYNGEK | LFLTKGQSQYNGEKFFSANGAGTTGHPHAKKYI |
lnc-VIP-1:2 | EOGC | 9 | 0.0752562 | noncoding | 63 | chr6 | 152983606 | 152987234 | + | 0.9987 | lnc-VIP-1 | 1 | 4.246 | 12.059 | -1.751 | 22 | noncoding | -0.359645391 | AVAAELAGR | n[145]AVAAELAGR | LTHASAQAPWRAVAAELAGRRLRTGVPRDFFLRGGRGGCAAFPSGCSRRPAAASPRAFRRGRG |
lnc-VIP-1:7 | EOGC | 13 | 0.145671 | noncoding | 95 | chr6 | 152983351 | 152989501 | + | 0.2174 | lnc-VIP-1 | 0.053 | -4.139 | -4.292 | -4.298 | 1 | noncoding | -0.409466508 | CSVGLIQSGEGLK | n[145]CSVGLIQSGEGLK | MFRCSVGLIQSGEGLKRKKDRPLPRTRESSNRYLWTGPCTISFPGFPASCLTLQLLDLLDLIITTQANPFKEVCLENLDKHKHLLRVPVQVLLTP |
lnc-VIP-3:1 | OV | 16 | 0.0117873 | noncoding | 132 | chr6 | 153131473 | 153132254 | + | 0.997 | lnc-VIP-3 | 0.996 | 0.728 | -1.62 | -0.919 | 55 | noncoding | -0.337776691 | GSAGTLGFGDARPELR | n[145]GSAGTLGFGDARPELR | LGAAPTVRRGSAGTLGFGDARPELRGRPGVPRASLGDSGSPPGPLQLHSPVARALLSWAAREPCTQEPACQAQQPACSGSRRKHSLRGGSRKCEVKQVLLPEGLYEASFTLLTSSPRKRTFSPKNQCRCSLA |
lnc-VIPR1-2:1 | OV | 18 | 0.0222331 | noncoding | 71 | chr3 | 42469639 | 42469879 | + | 0.9495 | lnc-VIPR1-2 | 1 | -4.716 | -3.633 | -3.799 | 1 | noncoding | -0.42862092 | LEDCGPRPFLLAINGVSR | n[145]LEDCGPRPFLLAINGVSR | LEDCGPRPFLLAINGVSRTKGSTQLFLKLKVFMPEMKQNSIWAKRPTETVAWFMPNSKAIFLLRLLDTESE |
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