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McDonnell Genome Institute
Washington University
Transcript
lnc-VIP-3:1
Chromosome
chr6
Gene Name
lnc-VIP-3
Start
153131473
CPC Label
noncoding
End
153132254
Cancer
OV
Strand
+
Peptide
GSAGTLGFGDARPELR
Modified Peptide
n[145]GSAGTLGFGDARPELR
Peptide Length
16
ORF Length
132
Open Reading Frame (ORF)
LGAAPTVRRGSAGTLGFGDARPELRGRPGVPRASLGDSGSPPGPLQLHSPVARALLSWAAREPCTQEPACQAQQPACSGSRRKHSLRGGSRKCEVKQVLLPEGLYEASFTLLTSSPRKRTFSPKNQCRCSLA
Conservation Score
0.996
PhyloCSF Frame 1
0.728
No. of Spectra
55
CPC Coding Probability
0.0117873
PhyloCSF Frame 2
-1.62
CNTI Index
noncoding
Max Probability
0.997
PhyloCSF Frame 3
-0.919
CNTI Score
-0.337776691
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