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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VPREB1-25:1 | BRCA-HER2-enriched | 20 | 0.287949 | noncoding | 97 | chr22 | 22026075 | 22026593 | + | 1 | lnc-VPREB1-25 | 1 | 0.054 | -2.828 | 6.591 | 5 | noncoding | -0.3550255 | TVMFGNSLPSGIPDRFSGSK | n[145]TVMFGNSLPSGIPDRFSGSK | MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQISHGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL |
lnc-VPREB1-25:1 | BRCA-Luminal B | 20 | 0.287949 | noncoding | 97 | chr22 | 22026075 | 22026593 | + | 1 | lnc-VPREB1-25 | 1 | 0.054 | -2.828 | 6.591 | 5 | noncoding | -0.3550255 | TVMFGNSLPSGIPDRFSGSK | n[145]TVMFGNSLPSGIPDRFSGSK | MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQISHGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL |
lnc-VPREB1-25:1 | BRCA-HER2-enriched | 29 | 0.287949 | noncoding | 97 | chr22 | 22026075 | 22026593 | + | 1 | lnc-VPREB1-25 | 1 | 0.054 | -2.828 | 6.591 | 2 | noncoding | -0.3550255 | VTLSCTGNSNNVGSYAVGWYQQISHGAPK | n[145]VTLSCTGNSNNVGSYAVGWYQQISHGAPK | MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQISHGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL |
lnc-VPREB1-25:1 | BRCA-Luminal B | 29 | 0.287949 | noncoding | 97 | chr22 | 22026075 | 22026593 | + | 1 | lnc-VPREB1-25 | 1 | 0.054 | -2.828 | 6.591 | 2 | noncoding | -0.3550255 | VTLSCTGNSNNVGSYAVGWYQQISHGAPK | n[145]VTLSCTGNSNNVGSYAVGWYQQISHGAPK | MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQISHGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL |
lnc-VPREB1-25:1 | CCRC | 15 | 0.287949 | noncoding | 97 | chr22 | 22026075 | 22026593 | + | 1 | lnc-VPREB1-25 | 1 | 0.054 | -2.828 | 6.591 | 3 | noncoding | -0.3550255 | TVMFGNSLPSGIPDR | n[230]TVMFGNSLPSGIPDR | MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQISHGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL |
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