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McDonnell Genome Institute
Washington University
Transcript
lnc-VPREB1-25:1
Chromosome
chr22
Gene Name
lnc-VPREB1-25
Start
22026075
CPC Label
noncoding
End
22026593
Cancer
BRCA-Basal-like
Strand
+
Peptide
SGTTASLTISGL
Modified Peptide
n[145]SGTTASLTISGL
Peptide Length
12
ORF Length
97
Open Reading Frame (ORF)
MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQISHGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL
Conservation Score
1
PhyloCSF Frame 1
0.054
No. of Spectra
1
CPC Coding Probability
0.287949
PhyloCSF Frame 2
-2.828
CNTI Index
noncoding
Max Probability
0.4828
PhyloCSF Frame 3
6.591
CNTI Score
-0.3550255
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