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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-VSX1-1:4 | OV | 31 | 0.0789012 | noncoding | 117 | chr20 | 25140788 | 25148790 | - | 0.1539 | lnc-VSX1-1 | 0.084 | 0 | 0 | 0 | 2 | noncoding | -0.293928487 | GGGRPGVGGGGSALPGGLGGAPAQTPRASRR | n[145]GGGRPGVGGGGSALPGGLGGAPAQTPRASRR | LLEMRGHSTILRAKQRRGTELLPRDVWPQKVLSRRVMKGRRFPRILEPEDAARVRVSKPGRVRGPGRRALGALSQGGGGGRGGGRPGVGGGGSALPGGLGGAPAQTPRASRRTRMMF |
lnc-VSX1-5:1 | CCRC | 7 | 0.529759 | coding | 43 | chr20 | 25132673 | 25144872 | - | 0.9988 | lnc-VSX1-5 | 0.07 | -5.049 | -4.269 | -4.833 | 2 | noncoding | -0.345687236 | RPELTQK | RPELTQK | MRPELTQKASLALQRSDLTVLLRGVSGVVCSGDIFGAHAISIW |
lnc-VTCN1-3:4 | OSCC | 15 | 0.0917423 | noncoding | 49 | chr1 | 117362802 | 117367299 | - | 0.961 | lnc-VTCN1-3 | 0.045 | -4.987 | -5.221 | -3.477 | 10 | coding | 0.726277574 | MLLEQSVTGFMGTLK | n[145]M[147]LLEQSVTGFM[147]GTLK | MNTDDYKTVGRMLLEQSVTGFMGTLKVPQSERRWIGKVRESSPIQCHLS |
lnc-VTCN1-3:4 | OSCC | 15 | 0.0917423 | noncoding | 49 | chr1 | 117362802 | 117367299 | - | 0.961 | lnc-VTCN1-3 | 0.045 | -4.987 | -5.221 | -3.477 | 10 | coding | 0.726277574 | MLLEQSVTGFMGTLK | n[145]MLLEQSVTGFM[147]GTLK | MNTDDYKTVGRMLLEQSVTGFMGTLKVPQSERRWIGKVRESSPIQCHLS |
lnc-VTI1A-1:1 | OSCC | 12 | 0.219316 | noncoding | 43 | chr10 | 112818804 | 112830788 | + | 0.9977 | lnc-VTI1A-1 | 0.047 | 0.878 | -3.266 | -4.242 | 6 | noncoding | -0.297693416 | LSRADTCLQVGR | n[145]LSRADTCLQVGR | MFIPPCNPHDCISKGAPLRLSRADTCLQVGRSPSALALLPGLA |
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