top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-VSX1-1:4
Chromosome
chr20
Gene Name
lnc-VSX1-1
Start
25140788
CPC Label
noncoding
End
25148790
Cancer
OV
Strand
-
Peptide
ALGALSQGGGGGR
Modified Peptide
n[145]ALGALSQGGGGGR
Peptide Length
13
ORF Length
117
Open Reading Frame (ORF)
LLEMRGHSTILRAKQRRGTELLPRDVWPQKVLSRRVMKGRRFPRILEPEDAARVRVSKPGRVRGPGRRALGALSQGGGGGRGGGRPGVGGGGSALPGGLGGAPAQTPRASRRTRMMF
Conservation Score
0.084
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.0789012
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.8439
PhyloCSF Frame 3
0
CNTI Score
-0.293928487
bottom of page