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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZDHHC8-1:2 | OV | 19 | 0.0838196 | noncoding | 66 | chr22 | 20198772 | 20204917 | + | 0.7946 | lnc-ZDHHC8-1 | 0.952 | -4.373 | -3.834 | -4.517 | 4 | noncoding | -0.307177538 | AAAWSPGQVAACGLLGQSL | n[145]AAAWSPGQVAACGLLGQSL | LGQAAETSRGFGADWQLICCRTGAGFMVALQGWSFCILNSPEDSKGRAAAWSPGQVAACGLLGQSL |
lnc-ZDHHC9-1:2 | BRCA-HER2-enriched | 13 | 0.279746 | noncoding | 60 | chrX | 129866106 | 129933830 | - | 0.9278 | lnc-ZDHHC9-1 | 0.565 | 0 | 0 | 0 | 2 | noncoding | -0.359776438 | SAHVSHFFLEEIK | n[145]SAHVSHFFLEEIK | MVYMYHIFFIQSIIDGHLGWFHKPARSAHVSHFFLEEIKKKEKKRKKRMGTIYLGWPEVW |
lnc-ZDHHC9-2:1 | PRAD | 27 | 0.0226495 | noncoding | 100 | chrX | 129904490 | 129906077 | - | 0.7019 | lnc-ZDHHC9-2 | 0.145 | 0 | 0 | 0 | 1 | noncoding | -0.389723219 | LECNGVISAHCNLHLPGSSDSPASASR | LECNGVISAHCNLHLPGSSDSPASASR | LRQSLAVSFRLECNGVISAHCNLHLPGSSDSPASASRVARITGTRHHARLIFAFLVETGFCHVGQAGLEFLASSDLPASASQSAEITGVSHRARPNIYIY |
lnc-ZEB1-1:3 | OSCC | 9 | 0.416469 | noncoding | 180 | chr10 | 31602669 | 31606218 | + | 0.6893 | lnc-ZEB1-1 | 1 | 0 | -4.533 | -4.718 | 2 | noncoding | -0.269977773 | LVFAVGDTK | n[145]LVFAVGDTK | LVFAVGDTKTIQAWPLPFSCQEKLKCVVRNCMWFLGLTALKHPGCIGWPQGTQFGYGQYFHAHCHSLLPQVYVGFPCSQPAGQARVALFLSLTLSLQTPNLQVLETLKESPFPLVETRGRNKQVESQGYSFQPMGLGLQHTKLTSRKAIFLDRFRPGIGWTDHMIQHPNWRSLNNRKRCH |
lnc-ZEB1-1:3 | OSCC | 16 | 0.416469 | noncoding | 180 | chr10 | 31602669 | 31606218 | + | 0.457 | lnc-ZEB1-1 | 1 | 0 | -4.533 | -4.718 | 2 | noncoding | -0.269977773 | TIQAWPLPFSCQEKLK | n[145]TIQAWPLPFSCQEKLK | LVFAVGDTKTIQAWPLPFSCQEKLKCVVRNCMWFLGLTALKHPGCIGWPQGTQFGYGQYFHAHCHSLLPQVYVGFPCSQPAGQARVALFLSLTLSLQTPNLQVLETLKESPFPLVETRGRNKQVESQGYSFQPMGLGLQHTKLTSRKAIFLDRFRPGIGWTDHMIQHPNWRSLNNRKRCH |
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