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McDonnell Genome Institute
Washington University
Transcript
lnc-ZEB1-1:3
Chromosome
chr10
Gene Name
lnc-ZEB1-1
Start
31602669
CPC Label
noncoding
End
31606218
Cancer
OSCC
Strand
+
Peptide
LVFAVGDTK
Modified Peptide
n[145]LVFAVGDTK
Peptide Length
9
ORF Length
180
Open Reading Frame (ORF)
LVFAVGDTKTIQAWPLPFSCQEKLKCVVRNCMWFLGLTALKHPGCIGWPQGTQFGYGQYFHAHCHSLLPQVYVGFPCSQPAGQARVALFLSLTLSLQTPNLQVLETLKESPFPLVETRGRNKQVESQGYSFQPMGLGLQHTKLTSRKAIFLDRFRPGIGWTDHMIQHPNWRSLNNRKRCH
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.416469
PhyloCSF Frame 2
-4.533
CNTI Index
noncoding
Max Probability
0.6893
PhyloCSF Frame 3
-4.718
CNTI Score
-0.269977773
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