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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZKSCAN5-1:2 | OV | 20 | 0.0371036 | noncoding | 71 | chr7 | 99500282 | 99501516 | + | 0.1136 | lnc-ZKSCAN5-1 | 0.146 | 0 | 0 | 0 | 1 | noncoding | -0.350143765 | RTLALSPGCLSLLSSLDYRR | n[145]RTLALSPGCLSLLSSLDYRR | LWGWGFIILPRLDKVVFFSFFRRTLALSPGCLSLLSSLDYRRAPPCPATFCILVEMGFHHVGQAGLELLTS |
lnc-ZKSCAN8-2:1 | CCRC | 8 | 0.999926 | coding | 269 | chr6 | 28161780 | 28169594 | + | 0.9118 | lnc-ZKSCAN8-2 | 1 | -4.45 | -4.1 | 10.471 | 21 | coding | 0.736941575 | AHLIIHQR | n[230]AHLIIHQR | MDPHQKVPSIYNGDTLQTPEYEKVSQYEDQLERHEGRHMEERRYKCNECGKKFAQSSGLVRHQRIHTGEKPYECDHYGKAFSVRSTLTVHERIHTGEKPYTCNECKKAFSVRAHLIIHQRIHNGEKPYECNECGKAFSVSSDLIKHQRIHTGEKPYECDECGKAFSVSSALIKHQRIHTGEKPYEYKECGKAFYVNSALINHQRIHSGEKPYECGECGKAFSQISTLIHHQRIHTGEKPYECEECGKAFHGSSNLTKHQKTHAKGKCHQ |
lnc-ZKSCAN8-2:1 | LUAD | 8 | 0.999926 | coding | 269 | chr6 | 28161780 | 28169594 | + | 0.8996 | lnc-ZKSCAN8-2 | 1 | -4.45 | -4.1 | 10.471 | 15 | coding | 0.736941575 | AHLIIHQR | n[230]AHLIIHQR | MDPHQKVPSIYNGDTLQTPEYEKVSQYEDQLERHEGRHMEERRYKCNECGKKFAQSSGLVRHQRIHTGEKPYECDHYGKAFSVRSTLTVHERIHTGEKPYTCNECKKAFSVRAHLIIHQRIHNGEKPYECNECGKAFSVSSDLIKHQRIHTGEKPYECDECGKAFSVSSALIKHQRIHTGEKPYEYKECGKAFYVNSALINHQRIHSGEKPYECGECGKAFSQISTLIHHQRIHTGEKPYECEECGKAFHGSSNLTKHQKTHAKGKCHQ |
lnc-ZMAT3-3:10 | OV | 11 | 0.178394 | noncoding | 74 | chr3 | 178323870 | 178385293 | - | 0.9017 | lnc-ZMAT3-3 | 0.293 | -4.943 | -5.998 | -3.799 | 3 | noncoding | -0.329118646 | LLSMGQQAFHK | n[145]LLSMGQQAFHK | LVSFYSPSVYTLVVFLDYCSSPDTLFMITHILILYLKVFSSSPSPSDKTKLLSMGQQAFHKLAPCLKQYLSIKL |
lnc-ZMAT3-4:1 | PRAD | 11 | 0.0295365 | noncoding | 40 | chr3 | 179017222 | 179020088 | - | 0.9977 | lnc-ZMAT3-4 | 0.999 | -4.825 | -4.904 | -5.814 | 1 | noncoding | -0.462379118 | LNTSFGPLEGK | LNTSFGPLEGKSIFLLITLFFLDIWQFFELKHILMAIVPN |
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