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McDonnell Genome Institute
Washington University
Transcript
lnc-ZKSCAN8-2:1
Chromosome
chr6
Gene Name
lnc-ZKSCAN8-2
Start
28161780
CPC Label
coding
End
28169594
Cancer
CCRC
Strand
+
Peptide
AHLIIHQR
Modified Peptide
n[230]AHLIIHQR
Peptide Length
8
ORF Length
269
Open Reading Frame (ORF)
MDPHQKVPSIYNGDTLQTPEYEKVSQYEDQLERHEGRHMEERRYKCNECGKKFAQSSGLVRHQRIHTGEKPYECDHYGKAFSVRSTLTVHERIHTGEKPYTCNECKKAFSVRAHLIIHQRIHNGEKPYECNECGKAFSVSSDLIKHQRIHTGEKPYECDECGKAFSVSSALIKHQRIHTGEKPYEYKECGKAFYVNSALINHQRIHSGEKPYECGECGKAFSQISTLIHHQRIHTGEKPYECEECGKAFHGSSNLTKHQKTHAKGKCHQ
Conservation Score
1
PhyloCSF Frame 1
-4.45
No. of Spectra
21
CPC Coding Probability
0.999926
PhyloCSF Frame 2
-4.1
CNTI Index
coding
Max Probability
0.9118
PhyloCSF Frame 3
10.471
CNTI Score
0.736941575
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