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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF33A-5:1 | BRCA-HER2-enriched | 9 | 0.901537 | coding | 96 | chr10 | 37894636 | 37896666 | + | 0.2965 | lnc-ZNF33A-5 | 1 | -3.278 | -3.228 | 5.736 | 4 | noncoding | -0.38002403 | TFICNSVLK | n[145]TFICNSVLK | MHTGDKPYVCKKCGKTFYHKADYTVHKRTHRGEKSYYCNKCGKTFICNSVLKSHQRTHTGEKPYGCNECGKSFSEKSVLTVHQRIHTGEKPYKCNE |
lnc-ZNF236-6:2 | HCC | 9 | 0.212296 | noncoding | 149 | chr18 | 77087544 | 77093410 | + | 0.8732 | lnc-ZNF236-6 | 0.072 | 0 | 0 | 0 | 15 | noncoding | -0.323521707 | SHQATSYRR | n[230]SHQATSYRR | LTQAEILPSLASPLAARSHQATSYRRRVQLRNMISEGRNKEGGALRVQLKTRGQTSQTPRRSRLLISRNRPFPSAAPLTPVTVCDDDERHACCPAQWGTHRPRVRISLFLTSHKELLLCFHHLHAATSIQCCALKVCLKLAACKLGHSF |
lnc-ZNF236-8:12 | OV | 8 | 0.333304 | noncoding | 124 | chr18 | 76491982 | 76493933 | + | 0.995 | lnc-ZNF236-8 | 1 | -1.65 | -0.648 | -0.036 | 11 | coding | 0.71837126 | FESPVAEK | n[145]FESPVAEK | MDEVPPRGLPAGVSGEVVGTWVLNLSIASSPSRWVQKRSNPAVLPEDTASPTFTRRCCSAQVGSVRFPRCVLREPHTSLPIFLRKSVPHACPGTKARETARFESPVAEKQSQPSSFLPLLQVPT |
lnc-ZNF239-1:1 | OV | 20 | 0.157194 | noncoding | 54 | chr10 | 43579607 | 43581819 | - | 0.6699 | lnc-ZNF239-1 | 0.656 | 0 | 0 | 0 | 16 | noncoding | -0.393530331 | SPLSPLLFSIILEVLARAIS | n[145]SPLSPLLFSIILEVLARAIS | LNTEKAVLRGKFLAINTFTKKAERHSLTSGARQRSPLSPLLFSIILEVLARAIS |
lnc-ZNF24-1:4 | OV | 19 | 0.833767 | coding | 93 | chr18 | 35279144 | 35290222 | - | 0.9645 | lnc-ZNF24-1 | 0.21 | 0 | 0 | 0 | 10 | noncoding | -0.261222485 | LAGGSSPGIAAAAQVMAAG | n[145]LAGGSSPGIAAAAQVM[147]AAG | MSESIIFRESSLGQDGVSHSVAQAGVLLMATVGHLDHLEWPLPRCWLQPGGSAHAVSFTEPEGAGTSRSPAPSKLAGGSSPGIAAAAQVMAAG |
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