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McDonnell Genome Institute

Washington University

Transcript

lnc-ZNF236-6:2

Chromosome

chr18

Gene Name

lnc-ZNF236-6

Start

77087544

CPC Label

noncoding

End

77093410

Cancer

HCC

Strand

+

Peptide

SHQATSYRR

Modified Peptide

n[230]SHQATSYRR

Peptide Length

9

ORF Length

149

Open Reading Frame (ORF)

LTQAEILPSLASPLAARSHQATSYRRRVQLRNMISEGRNKEGGALRVQLKTRGQTSQTPRRSRLLISRNRPFPSAAPLTPVTVCDDDERHACCPAQWGTHRPRVRISLFLTSHKELLLCFHHLHAATSIQCCALKVCLKLAACKLGHSF

Conservation Score

0.072

PhyloCSF Frame 1

0

No. of Spectra

15

CPC Coding Probability

0.212296

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8732

PhyloCSF Frame 3

0

CNTI Score

-0.323521707

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