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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF843-2:1 | BRCA-Luminal B | 18 | 0.888159 | coding | 91 | chr16 | 31456710 | 31459736 | - | 0.9986 | lnc-ZNF843-2 | 0.428 | -3.923 | -2.922 | -5.808 | 176 | noncoding | -0.253280359 | GPGFVICPFPCLIPFPSK | n[145]GPGFVICPFPCLIPFPSK | MDDARVVGAPEQTCMLSSGVALLHFWAGARGPGFVICPFPCLIPFPSKFPRLLFCQSVKRGKSGEESFVPGHWGLNMALLPGHCPNIYFYW |
lnc-ZNF843-2:1 | BRCA-HER2-enriched | 18 | 0.888159 | coding | 91 | chr16 | 31456710 | 31459736 | - | 0.9986 | lnc-ZNF843-2 | 0.428 | -3.923 | -2.922 | -5.808 | 176 | noncoding | -0.253280359 | GPGFVICPFPCLIPFPSK | n[145]GPGFVICPFPCLIPFPSK | MDDARVVGAPEQTCMLSSGVALLHFWAGARGPGFVICPFPCLIPFPSKFPRLLFCQSVKRGKSGEESFVPGHWGLNMALLPGHCPNIYFYW |
lnc-ZNF843-2:1 | BRCA-Luminal A | 18 | 0.888159 | coding | 91 | chr16 | 31456710 | 31459736 | - | 0.9986 | lnc-ZNF843-2 | 0.428 | -3.923 | -2.922 | -5.808 | 176 | noncoding | -0.253280359 | GPGFVICPFPCLIPFPSK | n[145]GPGFVICPFPCLIPFPSK | MDDARVVGAPEQTCMLSSGVALLHFWAGARGPGFVICPFPCLIPFPSKFPRLLFCQSVKRGKSGEESFVPGHWGLNMALLPGHCPNIYFYW |
lnc-ZNF843-2:1 | BRCA-Basal-like | 18 | 0.888159 | coding | 91 | chr16 | 31456710 | 31459736 | - | 0.9986 | lnc-ZNF843-2 | 0.428 | -3.923 | -2.922 | -5.808 | 176 | noncoding | -0.253280359 | GPGFVICPFPCLIPFPSK | n[145]GPGFVICPFPCLIPFPSK | MDDARVVGAPEQTCMLSSGVALLHFWAGARGPGFVICPFPCLIPFPSKFPRLLFCQSVKRGKSGEESFVPGHWGLNMALLPGHCPNIYFYW |
lnc-ZNF843-2:1 | BRCA-Luminal B | 7 | 0.888159 | coding | 243 | chr16 | 31456710 | 31459736 | - | 0.3976 | lnc-ZNF843-2 | 1 | 8.91 | 4.313 | 1.048 | 1 | noncoding | -0.253280359 | SASWDVR | n[145]SASWDVR | LMWRVRRARSARLRGVSLVAGSFSPPRASPAAAASCARQNESESVRVGFAAAILARASDSAPLLAADPRERNWKTGKSSGTASLTLFSATAVMQVGSCSSRPRKSVLAHEARQYLNRSASWDVRAVHEGDVVRVELLTPTSGSAGNSSRALQVGQGLRTAQKSDHGAFVPCPAPGVHSAGTAFSPLGSLRCPPAVVRPGLGTDSENPEPGRKCGVLTAPQTGSPRSVRGRRGLNLPRTFAAAS |
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