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McDonnell Genome Institute
Washington University
Transcript
lnc-ZNF843-2:1
Chromosome
chr16
Gene Name
lnc-ZNF843-2
Start
31456710
CPC Label
coding
End
31459736
Cancer
BRCA-Luminal B
Strand
-
Peptide
AVHEGDVVR
Modified Peptide
n[145]AVHEGDVVR
Peptide Length
9
ORF Length
243
Open Reading Frame (ORF)
LMWRVRRARSARLRGVSLVAGSFSPPRASPAAAASCARQNESESVRVGFAAAILARASDSAPLLAADPRERNWKTGKSSGTASLTLFSATAVMQVGSCSSRPRKSVLAHEARQYLNRSASWDVRAVHEGDVVRVELLTPTSGSAGNSSRALQVGQGLRTAQKSDHGAFVPCPAPGVHSAGTAFSPLGSLRCPPAVVRPGLGTDSENPEPGRKCGVLTAPQTGSPRSVRGRRGLNLPRTFAAAS
Conservation Score
1
PhyloCSF Frame 1
8.91
No. of Spectra
8
CPC Coding Probability
0.888159
PhyloCSF Frame 2
4.313
CNTI Index
noncoding
Max Probability
0.9956
PhyloCSF Frame 3
1.048
CNTI Score
-0.253280359
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