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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PCAT5:1 | OSCC | 23 | 0.148605 | noncoding | 115 | chr10 | 35778301 | 35800920 | + | 0.8255 | PCAT5 | 0.655 | 0 | 0 | 0 | 3 | noncoding | -0.362769778 | LDKIAMGSCCCSRMLPSETLTQR | n[145]LDKIAM[147]GSCCCSRMLPSETLTQR | LNQATGDDQCWVSWEPEDLQLCLGSTYQQEPDEEGGCVLNCFRKSPSAQDRLDKIAMGSCCCSRMLPSETLTQRRGAEIRKAKMASKNSNTPRRPGAMAHACNPSTLEDPGGWIT |
PCAT5:1 | OSCC | 23 | 0.148605 | noncoding | 115 | chr10 | 35778301 | 35800920 | + | 0.8255 | PCAT5 | 0.655 | 0 | 0 | 0 | 3 | noncoding | -0.362769778 | LDKIAMGSCCCSRMLPSETLTQR | n[145]LDKIAM[147]GSCCCSRM[147]LPSETLTQR | LNQATGDDQCWVSWEPEDLQLCLGSTYQQEPDEEGGCVLNCFRKSPSAQDRLDKIAMGSCCCSRMLPSETLTQRRGAEIRKAKMASKNSNTPRRPGAMAHACNPSTLEDPGGWIT |
PCAT6:16 | OV | 8 | 0.948438 | coding | 62 | chr1 | 202810953 | 202831446 | + | 0.5399 | PCAT6 | 0.337 | 0 | 0 | 0 | 2 | coding | 0.731476378 | DNIPVANK | n[145]DNIPVANK | MIKRQITHCKNGLTDFSKDNIPVANKHMKRFHHQSLGKCKSKPQMKYHFTPTRMAIFFFFFF |
PCAT6:16 | OV | 8 | 0.948438 | coding | 62 | chr1 | 202810953 | 202831446 | + | 0.939 | PCAT6 | 0.337 | 0 | 0 | 0 | 1 | coding | 0.731476378 | FHHQSLGK | n[145]FHHQSLGK | MIKRQITHCKNGLTDFSKDNIPVANKHMKRFHHQSLGKCKSKPQMKYHFTPTRMAIFFFFFF |
PCBP1-AS1:153 | OV | 8 | 0.167675 | noncoding | 167 | chr2 | 70055616 | 70081229 | - | 0.5942 | PCBP1-AS1 | 0.76 | 0 | 0 | 0 | 1 | noncoding | -0.341511928 | QLAQLLGR | n[145]QLAQLLGR | MCWGWYSWVWWLTPVIPALWAQRQEDCLSLRIQDKPGQHREPLCLPKQLAQLLGRLRKTSSGLPLIVHYETESCYVAQAGLELLTSSDPPVLASQVSGLRACAITPNLIHCLYKFFFLYSKNQKKQNWIHVQNMQVCYIAVRVPWWFAAPIDLSCKFPPLTPTPQQP |
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