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McDonnell Genome Institute
Washington University
Transcript
PCAT5:1
Chromosome
chr10
Gene Name
PCAT5
Start
35778301
CPC Label
noncoding
End
35800920
Cancer
OSCC
Strand
+
Peptide
LDKIAMGSCCCSRMLPSETLTQR
Modified Peptide
n[145]LDKIAM[147]GSCCCSRMLPSETLTQR
Peptide Length
23
ORF Length
115
Open Reading Frame (ORF)
LNQATGDDQCWVSWEPEDLQLCLGSTYQQEPDEEGGCVLNCFRKSPSAQDRLDKIAMGSCCCSRMLPSETLTQRRGAEIRKAKMASKNSNTPRRPGAMAHACNPSTLEDPGGWIT
Conservation Score
0.655
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.148605
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.8255
PhyloCSF Frame 3
0
CNTI Score
-0.362769778
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