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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr4|112617439|112619690|-|1|circRNA|ZGRF1|ENST00000445203.6|5 | circZGRF1(5) | ZGRF1 | MNVLHLINQIPTFPILCFTHWEKSILFPKTQKHIYLNLKIWERLEVHPLTMLRLKLPEKANNTGILEILQNFLD | ANNTGILEILQNFLD | No | Alternative | Alternative | 15 | 2 | ATG | TAG | NA | No |
chr4|112644424|112644871|+|2|circRNA|LARP7|NM_001267039|3,4 | circLARP7(3,4) | LARP7 | LKRKKKLKKRNGHELNRCLQILLSKWTSGLGMQIFTRIDFFENR | IDFFENR | No | Alternative | Alternative | 7 | 1 | CTG | TAG | TransCirc | No |
chr4|113264896|113274649|+|2|circRNA|ANK2|NM_001127493|15,16 | circANK2(15,16) | ANK2 | LPPAWVRQKLSSCFYNIWLIQMRPLQMGTHHCTSLPGRARWMWHQSYWKQEQPTP | LSSCFYNIWLIQMRPLQMGTHHCTSLPGR | No | Alternative | Alternative | 29 | 2 | TTG | TAG | NA | No |
chr4|118313200|118318556|-|3|circRNA|PRSS12|NM_003619|7,6,5 | circPRSS12(7,6,5) | PRSS12 | LDDVSCSGKETRFLQCSRRQWGRHDCSHREDVSIACYPGGEGHRLSLVALPKHGIRHILGKGLAQLCWMKYAALGMSFQLSSVQRAPGESITVAIKKMLECPVPL | GLAQLCWMK | No | Alternative | Junction | 9 | 2 | TTG | TAA | TransCirc | No |
chr4|119023429|119032027|+|3|circRNA|SYNPO2|ENST00000610556.4|2,3,4 | circSYNPO2(2,3,4) | SYNPO2 | MLPHLRMCRLRQCTRYQPIPLLLPSLQRPPHQSVHPQCLWAFPPRQSKNQPHHLILWHQGQSSQPRKVVSQFRFEIRAKPLGLGSVREMKWFPSMATLVQISPTLKSSSSWKA | FEIRAKPLGLGSVR | No | Alternative | Junction | 14 | 1 | ATG | TAA | TransCirc | No |
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