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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr11|130461488|130462780|+|3|circRNA|ADAMTS15|ENST00000299164.3|2,3,4 | circADAMTS15(2,3,4) | ADAMTS15 | LPPGPTQQAHLPARGSAGRQLHPEPAVRAGFWRGLQALSLHAVLHQAVVHREGQGTDGVPDPPLPLGRWHQLWRGQALPQRGLRGETQPQQAQGPVWSHHL | EGQGTDGVPDPPLPLGR | No | Alternative | Junction | 17 | 2 | CTG | TGA | TransCirc | No |
chr11|130461488|130462780|+|3|circRNA|ADAMTS15|ENST00000299164.3|2,3,4 | circADAMTS15(2,3,4) | ADAMTS15 | LPPGPTQQAHLPARGSAGRQLHPEPAVRAGFWRGLQALSLHAVLHQAVVHREGQGTDGVPDPPLPLGRWHQLWRGQALPQRGLRGETQPQQAQGPVWSHHL | GQALPQRGLR | No | Alternative | Junction | 10 | 2 | CTG | TGA | TransCirc | No |
chr11|133911885|133946258|-|18|circRNA|IGSF9B|ENST00000533871.6|19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2 | circIGSF9B(19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2) | IGSF9B | MRRDPPSDGTAPTLCRRVVQVRGPHPYLHQVWLLPAARGP | DPPSDGTAPTLCRR | No | Alternative | Alternative | 14 | 1 | ATG | TGA | TransCirc | No |
chr11|133911885|133946258|-|18|circRNA|IGSF9B|ENST00000533871.6|19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2 | circIGSF9B(19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2) | IGSF9B | MRRDPPSDGTAPTLCRRVVQVRGPHPYLHQVWLLPAARGP | GPHPYLHQVWLLPAAR | No | Alternative | Alternative | 16 | 1 | ATG | TGA | TransCirc | No |
chr11|133919741|133927091|-|6|circRNA|IGSF9B|ENST00000533871.6|18,17,16,15,14,13 | circIGSF9B(18,17,16,15,14,13) | IGSF9B | LGRQVARQGPCPSAPRRQVAGQTYATSGKPRAAATYKPRHGHTCAALPRAG | QGPCPSAPR | No | Alternative | Alternative | 9 | 1 | TTG | TGA | TransCirc | No |
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