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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8|38836161|38838546|+|2|circRNA|TACC1|ENST00000519416.5|7,8 | circTACC1(7,8) | TACC1 | LEMRGCWSPLQRRPLCRCPVEVRAPWMGSASANQTRQPCSP | GCWSPLQR | No | Alternative | Junction | 8 | 1 | TTG | TAA | TransCirc | No |
chr8|38952165|38953367|+|3|circRNA|PLEKHA2|NM_021623|7,8,9 | circPLEKHA2(7,8,9) | PLEKHA2 | LRTIFLKDVLKTHECLVKSGTVGMGRKGVSPGPTPSFEGLRVTSPRQAAVLPLGLPSLRVVTA | GVSPGPTPSFEGLR | No | Alternative | Junction | 14 | 1 | CTG | TGA | TransCirc | No |
chr8|38952165|38953367|+|3|circRNA|PLEKHA2|NM_021623|7,8,9 | circPLEKHA2(7,8,9) | PLEKHA2 | LRTIFLKDVLKTHECLVKSGTVGMGRKGVSPGPTPSFEGLRVTSPRQAAVLPLGLPSLRVVTA | KGVSPGPTPSFEGLR | No | Alternative | Junction | 15 | 1 | CTG | TGA | TransCirc | No |
chr8|39136656|39257343|+|15|circRNA|ADAM32|NM_001313994|2,3,4,5,6,7,8,9,10,11,12,13,14,15,16 | circADAM32(2,3,4,5,6,7,8,9,10,11,12,13,14,15,16) | ADAM32 | MERASGKTENTWLLGFLIALPILIVTTAIVLARKQLKKWFAKEEEFPSSENKYPILFQ | EEEFPSSENK | No | Junction | Junction | 10 | 3 | ATG | TAG | TransCirc | No |
chr8|41614982|41620956|-|1|ciRNA|RP11-360L9.8|ENST00000581909.1|1 | ciRP11-360L9.8(1) | RP11-360L9.8 | LAMADFTLFANWTASSSACKKEQMRPLSPGLTLHRAGADLPGAGTHLSSHGRQVPHAADNGPAGHHSQQVRHHPVFAAVPEGIAKLRVILKTMESWR | KEQMRPLSPGLTLHR | No | Alternative | Alternative | 15 | 1 | CTG | TAA | NA | No |
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