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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16|734736|737329|-|3|circRNA|NARFL|ENST00000251588.6|5,4,3 | circNARFL(5,4,3) | NARFL | LESQREFVRRFRGQADCRQALPLLASACPGRRDPEAGEGQGLAKRLPGVQRLHHLRRDRAYHPAEPRGAEEGSRC | RDPEAGEGQGLAK | No | Alternative | Junction | 13 | 3 | CTG | TAA | TransCirc | No |
chr16|74360632|74360891|-|1|circRNA|RP11-252A24.2|ENST00000566802.5|2 | circRP11-252A24.2(2) | RP11-252A24.2 | LVRDMMFYWLLSIVGRQRASPGWQNWSSARNSASAAEARSMALPTQAQVVVCGGGITGTSVAHHQSKMGWKDIVLLEQGSLSS | DMMFYWLLSIVGRQR | No | Alternative | Junction | 15 | 3 | TTG | TGA | TransCirc | No |
chr16|74453170|74471286|-|12|circRNA|GLG1|ENST00000205061.9|26,25,24,23,22,21,20,19,18,17,16,15 | circGLG1(26,25,24,23,22,21,20,19,18,17,16,15) | GLG1 | MQVMTSPSKNYILSVISGSICILFLIGLMCGRITKRVTRELKDRMWQITR | DRMWQITR | No | Junction | Junction | 8 | 1 | ATG | TAG | TransCirc | No |
chr16|74477395|74494831|-|7|circRNA|GLG1|ENST00000205061.9|12,11,10,9,8,7,6 | circGLG1(12,11,10,9,8,7,6) | GLG1 | LIWENGAVRKQRLDRHKLVRAECISASLTINLKNP | AECISASLTINLK | No | Alternative | Junction | 13 | 2 | TTG | TGA | TransCirc | No |
chr16|74626342|74636577|-|5|circRNA|RFWD3|ENST00000361070.8|12,11,10,9,8 | circRFWD3(12,11,10,9,8) | RFWD3 | MPFSKAQRMMATSWCVLGMKQQILPWTCKNLRHIKVRIYSNPGAPKHGS | IYSNPGAPKHGS | No | Alternative | Junction | 12 | 1 | ATG | TGA | TransCirc | No |
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