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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16|30483826|30484263|+|2|circRNA|ITGAL|ENST00000356798.10|8,9 | circITGAL(8,9) | ITGAL | LSCRRRSMSLRDRGVPGGAGGPARCHQSAYHHHGWGGH | DRGVPGGAGGPAR | No | Alternative | Junction | 13 | 2 | CTG | TGA | riboCIRC,TransCirc | No |
chr16|30582510|30583443|-|1|circRNA|ZNF785|ENST00000470110.2|3 | circZNF785(3) | ZNF785 | LRPPLHLFFPPPQSPAHSLRQPALPLRGVWERLQAQDRPGSPSVDPPLLQREARVAAGRGGAFRAHPCFGRQGSPSSLPALSRYISRVWVMAFTQTGQRFPGEEEARIQGWE | EARVAAGR | No | Alternative | Junction | 8 | 2 | CTG | TGA | TransCirc | No |
chr16|30582510|30583443|-|1|circRNA|ZNF785|ENST00000470110.2|3 | circZNF785(3) | ZNF785 | LTAAAASPILPSSSVTGAFTPTAGPSPAWSVGKASSARPPWKPIGGSTAPAARGARGSRPWWGVQSPSLFWEARIPQFTSGTFQIYFKSVGDGVHTNWSAFPWRGRGKDPGMGMRRRKG | ASSARPPWKPIGGSTAPAAR | No | Alternative | Junction | 20 | 1 | CTG | TGA | TransCirc | No |
chr16|30582510|30583443|-|1|circRNA|ZNF785|ENST00000470110.2|3 | circZNF785(3) | ZNF785 | LTAAAASPILPSSSVTGAFTPTAGPSPAWSVGKASSARPPWKPIGGSTAPAARGARGSRPWWGVQSPSLFWEARIPQFTSGTFQIYFKSVGDGVHTNWSAFPWRGRGKDPGMGMRRRKG | DPGMGMRR | No | Alternative | Junction | 8 | 1 | CTG | TGA | TransCirc | No |
chr16|30713207|30713711|+|2|circRNA|SRCAP|NM_006662|15,16 | circSRCAP(15,16) | SRCAP | LDQAQCLSCVYHILQAGAAGPPGLPSQELALSHSG | LDQAQCLSCVYHILQAGAAGPPGLPSQELALSHSG | No | Alternative | Alternative | 35 | 1 | CTG | TGA | TransCirc | No |
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