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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr6|121106022|121256285|-|15|circRNA|TBC1D32|NM_152730|30,29,28,27,26,25,24,23,22,21,20,19,18,17,16 | circTBC1D32(30,29,28,27,26,25,24,23,22,21,20,19,18,17,16) | TBC1D32 | MLLKAELPLVFSAFHMSGFAPSQSYRCSYNCPVFEKTSR | CSYNCPVFEKTSR | No | Alternative | Junction | 13 | 1 | ATG | TGA | TransCirc | No |
chr6|121106022|121256285|-|15|circRNA|TBC1D32|NM_152730|30,29,28,27,26,25,24,23,22,21,20,19,18,17,16 | circTBC1D32(30,29,28,27,26,25,24,23,22,21,20,19,18,17,16) | TBC1D32 | MLLKAELPLVFSAFHMSGFAPSQSYRCSYNCPVFEKTSR | MLLKAELPLVFSAFHMSGFAPSQSYR | No | Junction | Junction | 26 | 1 | ATG | TGA | TransCirc | No |
chr6|121279120|121299505|-|6|circRNA|TBC1D32|NM_152730|15,14,13,12,11,10 | circTBC1D32(15,14,13,12,11,10) | TBC1D32 | LARIASVEEGLILLLYGANMNSSEESMHIIAELQY | IASVEEGLILLLYGANMNSSEESMHIIAELQY | No | Junction | Junction | 32 | 1 | TTG | TAA | TransCirc | No |
chr6|121279120|121299505|-|6|circRNA|TBC1D32|NM_152730|15,14,13,12,11,10 | circTBC1D32(15,14,13,12,11,10) | TBC1D32 | LARIASVEEGLILLLYGANMNSSEESMHIIAELQY | LARIASVEEGLILLLYGANMNSSEESMHIIAELQY | No | Junction | Junction | 35 | 1 | TTG | TAA | TransCirc | No |
chr6|125045210|125076858|+|3|circRNA|RNF217|ENST00000560949.5|2,3,4 | circRNF217(2,3,4).A | RNF217 | MTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKYRYLPERPHLRRLVRGSVCGTTWPSRNQMPHHRVF | LVRGSVCGTTWPSR | No | Junction | Junction | 14 | 1 | ATG | TGA | TransCirc | No |
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