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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5|77118319|77118521|+|1|circRNA|ZBED3-AS1|ENST00000503969.5|3 | circZBED3-AS1(3) | ZBED3-AS1 | MRCFRVLWVRRERWCPPHGGQPRSCMKPVRKTQILVPNMRTGQAEGESGRRGASLSASSFWAWMLESHEVLQSTLGEEGKMVPTTWRPA | KTQILVPNMR | No | Alternative | Junction | 10 | 3 | ATG | TAG | TransCirc | No |
chr5|7802217|7820689|+|4|circRNA|ADCY2|ENST00000338316.8|21,22,23,24 | circADCY2(21,22,23,24) | ADCY2 | LRLRHVCLHSGFQRILYRIRREQGGLGMPSAPERDHR | EQGGLGMPSAPER | No | Alternative | Alternative | 13 | 2 | CTG | TGA | NA | No |
chr5|7802217|7820689|+|4|circRNA|ADCY2|ENST00000338316.8|21,22,23,24 | circADCY2(21,22,23,24) | ADCY2 | LRLRHVCLHSGFQRILYRIRREQGGLGMPSAPERDHR | EQGGLGMPSAPERDHR | No | Alternative | Alternative | 16 | 2 | CTG | TGA | NA | No |
chr5|78955294|78969192|-|3|circRNA|ARSB|ENST00000264914.8|4,3,2 | circARSB(4,3,2) | ARSB | LFLYLALQSVHEPLQVPEEYLKPYDFIQDKNRHHYAGMVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDPYRFTAPNNLALSAQLCSSG | FTAPNNLALSAQLCSSG | No | Alternative | Junction | 17 | 1 | CTG | TGA | TransCirc | No |
chr5|79277909|79291299|+|3|circRNA|JMY|NM_152405|2,3,4 | circJMY(2,3,4) | JMY | LCMIECELIRRNLVKHHGQRLLNGWKNSSMQFLRKLCR | LCMIECELIR | No | Alternative | Alternative | 10 | 1 | CTG | TGA | NA | No |
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