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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5|140167364|140167802|+|2|circRNA|CTB-131B5.5|ENST00000523154.5|3,4 | circCTB-131B5.5(3,4) | CTB-131B5.5 | MPTSSMARCWSAPAAASLVAFIKGLCFFGYDTKRSC | GLCFFGYDTKR | No | Junction | Junction | 11 | 2 | ATG | TAA | NA | No |
chr5|140438460|140449305|+|5|circRNA|ANKHD1|ENST00000616482.4|3,4,5,6,7 | circANKHD1(3,4,5,6,7) | ANKHD1 | LDMVRFLLEAGADQEHKTDEMHTALMEACMELANCQLLMVKLLQILRYSGD | FLLEAGADQEHKTDEMHTALMEACMELANCQLLMVK | No | Junction | Junction | 36 | 3 | TTG | TGA | TransCirc | No |
chr5|140485120|140529796|+|18|circRNA|ANKHD1|ENST00000297183.10|12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29 | circANKHD1(12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29) | ANKHD1 | LAQPHFSITSAVFLIVVRCQLTRAGEMVHCPHELLQMPLSLFSQRSWVTQCLDTWKTCTLITQRHLASDHLPSEFLLVQLVPMLTGLQPIMIIQ | HLASDHLPSEFLLVQLVPMLTGLQPIMIIQ | No | Junction | Junction | 30 | 3 | TTG | TAG | TransCirc | No |
chr5|140485120|140529796|+|18|circRNA|ANKHD1|ENST00000297183.10|12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29 | circANKHD1(12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29) | ANKHD1 | LAQPHFSITSAVFLIVVRCQLTRAGEMVHCPHELLQMPLSLFSQRSWVTQCLDTWKTCTLITQRHLASDHLPSEFLLVQLVPMLTGLQPIMIIQ | LAQPHFSITSAVFLIVVR | No | Alternative | Junction | 18 | 3 | TTG | TAG | TransCirc | No |
chr5|140485120|140529796|+|18|circRNA|ANKHD1|ENST00000297183.10|12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29 | circANKHD1(12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29) | ANKHD1 | LSPLHLSLAGKLPPHFYLQVLLKHSFLHKRWSLSLLCHPPKRKCPHRTSPWQTYVPHLQLQTVAVALPATPRELQKLTHPVVPLLLPVTHKRRHSHPVCLI | LSPLHLSLAGKLPPHFYLQVLLK | No | Alternative | Alternative | 23 | 3 | CTG | TAA | TransCirc | No |
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