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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr9|128170019|128176475|2|88,125|0,6331 | circCIZ1(NE,NE) | CIZ1 | LVQHLPALLHGGPDPTPQDTGPQGVPGPHVGASAPAAARGDPAHEPSLPPVPAARAPGRPGDRG | APGRPGDR | No | Alternative | Junction | 8 | 3 | CTG | TGA | TransCirc | No |
chr9|128170019|128176475|2|88,125|0,6331 | circCIZ1(NE,NE) | CIZ1 | LVQHLPALLHGGPDPTPQDTGPQGVPGPHVGASAPAAARGDPAHEPSLPPVPAARAPGRPGDRG | GDPAHEPSLPPVPAAR | No | Alternative | Junction | 16 | 3 | CTG | TGA | TransCirc | Yes |
chr9|128694837|128695133|1|296|0 | circSET(NE).B | SET | LWEKRKTCSLRSAGSWRVLGPCVVVHRILAFFLLSLYIGLREYTVSLCEYGQLAFTNMYLSTFLSRIQWEKSLYPFLFEVHFYPFLSEQKLYGINTTELCGKKEKPAPFALLEAGGC | VLGPCVVVHR | No | Alternative | Junction | 10 | 1 | CTG | TAG | NA | Yes |
chr9|128826021|128826629|2|68,45|0,563 | circSPOUT1(NE,1S) | SPOUT1 | LWRGNSQELGRRGRQGIVVDRPTRPGHGSFVNCGMKKDCGGGIHRSWEEGAGRASWWIGPPGQATAPLSTVA | SWEEGAGR | No | Alternative | Junction | 8 | 3 | CTG | TGA | TransCirc | No |
chr9|130458478|130466762|3|111,57,38|0,5632,8246 | circASS1(NE,S1S,NE) | ASS1 | LGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRTATSWAPLLPGPASPANKWKSPSGRGPSMCPTAPQERGTIRSGLSSAATHWPPR | LPGPASPANK | Yes | Alternative | Junction | 10 | 1 | CTG | TAA | TransCirc | No |
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