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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr3|9453738|9464672|2|130,36|0,10898 | circSETD5(3,S4S) | SETD5 | LYPKRLELSTYTKAMRIVALLVSAKTMQTASRCNTPLQFERWIKQALEEGMTQTSSVPQETRTQHLYQSNENSSSSSICKDNADC | CNTPLQFERWIK | Yes | Junction | Junction | 12 | 2 | CTG | TAG | TransCirc | Yes |
chr3|9453738|9464672|2|130,36|0,10898 | circSETD5(3,S4S) | SETD5 | LYPKRLELSTYTKAMRIVALLVSAKTMQTASRCNTPLQFERWIKQALEEGMTQTSSVPQETRTQHLYQSNENSSSSSICKDNADC | LELSTYTK | Yes | Alternative | Junction | 8 | 2 | CTG | TAG | TransCirc | No |
chr3|9453738|9464672|2|130,36|0,10898 | circSETD5(3,S4S) | SETD5 | LYPKRLELSTYTKAMRIVALLVSAKTMQTASRCNTPLQFERWIKQALEEGMTQTSSVPQETRTQHLYQSNENSSSSSICKDNADC | TMQTASR | Yes | Alternative | Junction | 7 | 2 | CTG | TAG | TransCirc | No |
chr3|9453738|9464672|2|130,36|0,10898 | circSETD5(3,S4S) | SETD5 | LYPKRLELSTYTKAMRIVALLVSAKTMQTASRCNTPLQFERWIKQALEEGMTQTSSVPQETRTQHLYQSNENSSSSSICKDNADC | TMQTASRCNTPLQFER | Yes | Junction | Junction | 16 | 2 | CTG | TAG | TransCirc | Yes |
chr3|9662317|9671170|4|58,76,61,123|0,6401,7114,8730 | circMTMR14(NE,L1,2,3) | MTMR14 | LDGESCMDAQATTIFSQGVQMMPGQMWRTSRRRTVLFEVVTRIFLIRSEAMTSSCFDTCQSNTSVT | LDGESCMDAQATTIFSQGVQMMPGQMWR | No | Alternative | Junction | 28 | 3 | CTG | TGA | TransCirc | Yes |
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