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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr2|69806384|69808189|3|114,83,65|0,1521,1740 | circANXA4(S1,L1S,NE) | ANXA4 | LIDDLKSELSGNFEQVIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQTYSASREIPV | ISQTYSASR | No | Alternative | Junction | 9 | 1 | TTG | TAG | NA | Yes |
chr2|69806384|69808189|3|114,83,65|0,1521,1740 | circANXA4(S1,L1S,NE) | ANXA4 | LIDDLKSELSGNFEQVIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQTYSASREIPV | RISQTYSASR | No | Alternative | Junction | 10 | 1 | TTG | TAG | NA | Yes |
chr2|71355718|71370005|2|62,96|0,14191 | circZNF638(NE,S3) | ZNF638 | LSTVTSTAITAIMKYIETTPLTIKGKSVKICVPGKKKAQDWIQHQNTSTHIESCRQLRQQQLLQL | LSTVTSTAITAIMK | No | Alternative | Junction | 14 | 3 | CTG | TGA | TransCirc | Yes |
chr2|71355718|71370005|2|62,96|0,14191 | circZNF638(NE,S3) | ZNF638 | LSTVTSTAITAIMKYIETTPLTIKGKSVKICVPGKKKAQDWIQHQNTSTHIESCRQLRQQQLLQL | LSTVTSTAITAIMKYIETTPLTIK | No | Alternative | Junction | 24 | 3 | CTG | TGA | TransCirc | Yes |
chr2|74458638|74460328|4|33,103,177,108|0,1004,1234,1582 | circWBP1(S1,NE,2,3S).A | WBP1 | LAAAPTTMSSGGSGCSGLSSSSLAAVAPSATDELNSGCNNSSGSVKSTCWPIMGHAMGLVLSLPVHCLTFASSAPSSPQPTRMWFTAQAHHPPLILWPQAAP | STCWPIMGHAMGLVLSLPVHCLTFASSAPSSPQPTR | No | Alternative | Junction | 36 | 2 | CTG | TGA | NA | No |
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