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Long-Read CircRNA Encoded Peptides

Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:

*Click CircRNA to view comprehensive information in new page. 

*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"

*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)

CircRNA
CircRNA UID
Gene
ORF
Peptide
ORF Found in Short-Read
Peptide Type
ORF Type
Peptide Length
Frame
Start Codon
Stop Codon
Ribo-Seq Peptide Support
Neoantigen Support
chr15|43021274|43025429|3|101,235,56|0,3474,4099
circUBR1(L2,NE,S5S)
UBR1
LGSSAMNIQMLLEKLKGIPQLEGQKDMITWILQAEHMQKKRRKQENKDEGKNIAATTTS
MITWILQAEHMQK
No
Junction
Junction
13
3
TTG
TGA
TransCirc
Yes
chr15|43021274|43025429|3|101,235,56|0,3474,4099
circUBR1(L2,NE,S5S)
UBR1
LNICRRKGENKKTKMKVKTLPPPPPPEFCPAFSKVINLLNCDIMMYILRTVFERAIDTDSNLWTEGMLQMVCLPEIFSLHQVLEFLGS
TLPPPPPPEFCPAFSKVINLLNCDIMMYILR
No
Junction
Junction
31
1
CTG
TAG
TransCirc
Yes
chr15|43021274|43025429|3|101,47,56|0,3662,4099
circUBR1(L2,NE,S5S).A
UBR1
LPCFQQRLGSSAMNIQMLLEKLKGIPQLEGQKDMITWILQAEHMQKKRRKQENKDEGKNIAATTTS
LPCFQQRLGSSAMNIQMLLEK
No
Alternative
Junction
21
1
CTG
TGA
TransCirc
Yes
chr15|44497026|44503850|2|43,297|0,6527
circCTDSPL2(1S,NE).A
CTDSPL2
LKISKINKLWVSCPEIRLCYYFIKHVPPLTEEQHLLNDLPLSPSRTGAQFFEDVIELLSPNVAD
LWVSCPEIR
No
Alternative
Junction
9
3
CTG
TGA
NA
No
chr15|50586391|50592626|4|97,65,267,335|0,3200,5519,5900
circTRPM7(NE,NE,NE,3L)
TRPM7
MCIQIKEVGDRVNYIKRSLQSLDSQIGHLQDLSALTVDTLKTLTAQKASEASKVHNEITRELSISKHLAQNLIDDGPVRPSVWKKHGVVNTLSSSLPQGDLESNNPFHCALFPSAVSPPELRQRLHGVELLKIFNKNQKLGSSSTSIPHLSSPPTKFFVSTPSQPSCKSHLETGTKDQETVCSKATEGDNTEFGAFVGHRDSMDLQRFKETSNKIKILSNNNTSENTLKRVSSLAGFTDCHRTSIPVHSKQEWNRCAFRLKKLEIVSTT
LEIVSTT
Yes
Alternative
Junction
7
2
ATG
TAA
TransCirc
No
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