top of page
CircRNA
chr11|71092421|71119032|-|5|circRNA|SHANK2|NM_012309|7,6,5,4,3
CircRNA UID
circSHANK2(7,6,5,4,3)
Gene
SHANK2
Open Reading Frame (ORF)
LVHPQIIKTVTASPRCITQPSSEVIPTAASFSCTNTPLCAAKMRTAGTRSTRNAFDLTRMPQCGLQSSGSCVH
Peptide
TVTASPR
ORF Found in Long-Read
false
Peptide Length
7
Stop Codon
TAA
Peptide Type
Alternative
Frame
2
Proteome Support
TCGA
ORF Type
Junction
Start Codon
TTG
Number of Amino Acids from 3' Exons
7
Number of Amino Acids from 5' Exons
0
Short-Read Rescue Status
NA
CircRNA Exists in PepTransDB
false
Differentially Expressed in mCRC
NA
Peptide Exists in PepTransDB
false
Ribo-Seq Peptide Support
Ribo-Seq CircRNA Support
TransCirc
TranCirc
Neoantigen Support
false
bottom of page