top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RAMP2-AS1:21 | OV | 8 | 0.211218 | noncoding | 99 | chr17 | 42759552 | 42760973 | - | 0.9036 | RAMP2-AS1 | 0.858 | -2.516 | -4.576 | -3.342 | 21 | noncoding | -0.353137201 | IISTMMQK | n[145]IISTMMQK | MGTDNLLSSSMVKRLLLQRIQWERVNGLLDVNSKVLLVRIISTMMQKRAMQSLRHFRLGPNLVLPACLGLLLSRRKHGRFLSDKMGGRSKEVQKAKQAI |
RAMP2-AS1:21 | OV | 15 | 0.211218 | noncoding | 99 | chr17 | 42759552 | 42760973 | - | 0.3159 | RAMP2-AS1 | 0.858 | -2.516 | -4.576 | -3.342 | 1 | noncoding | -0.353137201 | IISTMMQKRAMQSLR | n[145]IISTM[147]M[147]QKRAMQSLR | MGTDNLLSSSMVKRLLLQRIQWERVNGLLDVNSKVLLVRIISTMMQKRAMQSLRHFRLGPNLVLPACLGLLLSRRKHGRFLSDKMGGRSKEVQKAKQAI |
RAMP2-AS1:22 | BRCA-HER2-enriched | 15 | 0.139835 | noncoding | 88 | chr17 | 42752879 | 42753799 | - | 0.9781 | RAMP2-AS1 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.321934297 | LSAKPAPPKPQPKPK | n[145]LSAKPAPPKPQPKPK | MPKRKAKGDAKGDKAKRRSTRLSAKPAPPKPQPKPKKAPAKKGEKIPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGVAKASDE |
RAMP2-AS1:22 | EOGC | 8 | 0.139835 | noncoding | 88 | chr17 | 42752879 | 42753799 | - | 0.916 | RAMP2-AS1 | 1 | 0 | 0 | 0 | 21 | noncoding | -0.321934297 | AEGAGVAK | n[145]AEGAGVAK | MPKRKAKGDAKGDKAKRRSTRLSAKPAPPKPQPKPKKAPAKKGEKIPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGVAKASDE |
RAMP2-AS1:22 | LUAD | 8 | 0.139835 | noncoding | 88 | chr17 | 42752879 | 42753799 | - | 0.996 | RAMP2-AS1 | 1 | 0 | 0 | 0 | 7 | noncoding | -0.321934297 | AEGAGVAK | n[230]AEGAGVAK | MPKRKAKGDAKGDKAKRRSTRLSAKPAPPKPQPKPKKAPAKKGEKIPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGVAKASDE |
Page 1 of 1
bottom of page