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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SIX1-2:1 | OV | 20 | 0.00927587 | noncoding | 33 | chr14 | 60638598 | 60644508 | - | 0.828 | lnc-SIX1-2 | 0.169 | -5.146 | -7 | -6.095 | 7 | noncoding | -0.394633523 | HLDFLTQKPTWMLNMIDLGK | n[145]HLDFLTQKPTWMLNM[147]IDLGK | MGRFQKHLDFLTQKPTWMLNMIDLGKRLGEAKH |
lnc-SIX1-4:1 | BRCA-Luminal B | 7 | 0.0171286 | noncoding | 53 | chr14 | 60507272 | 60508683 | - | 0.9959 | lnc-SIX1-4 | 1 | -2.981 | -3.93 | -4.882 | 1 | noncoding | -0.371729011 | VHFLEIR | n[145]VHFLEIR | LPTASTERLSFLRVHFLEIRQGRGKIKRAMKIMTKHKPSFPWSDFRISRKDNF |
lnc-SIX2-6:1 | OSCC | 9 | 0.0725422 | noncoding | 99 | chr2 | 44809080 | 44811299 | - | 0.9712 | lnc-SIX2-6 | 0.233 | -5.382 | -4.816 | -4.804 | 10 | noncoding | -0.37469191 | TLQLTDHTK | n[145]TLQLTDHTK | LQARKKVPTLHRVAWDKGLSGKWVAGVLSRSHHPKKQWAGRGTANHRRKPKKTLQLTDHTKLYQLALMRRGLCHVSFVPTPLPQDQHHHHHQHHHHHHQ |
lnc-SKAP2-73:1 | OV | 17 | 0.0210851 | noncoding | 34 | chr7 | 26499644 | 26505349 | - | 0.4574 | lnc-SKAP2-73 | 0.088 | -5.206 | -5.21 | -5.4 | 1 | noncoding | -0.386573094 | EVELPYAAGEIYNHCGK | n[145]EVELPYAAGEIYNHCGK | LTTPNVGKDVKEVELPYAAGEIYNHCGKQLGNFL |
lnc-SKAP2-73:1 | OV | 8 | 0.0210851 | noncoding | 34 | chr7 | 26499644 | 26505349 | - | 0.6629 | lnc-SKAP2-73 | 0.088 | -5.206 | -5.21 | -5.4 | 1 | noncoding | -0.386573094 | LTTPNVGK | n[145]LTTPNVGK | LTTPNVGKDVKEVELPYAAGEIYNHCGKQLGNFL |
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