top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SIPA1L3-4:2 | LUAD | 41 | 0.996045 | coding | 164 | chr19 | 37791734 | 37792767 | + | 0.8917 | lnc-SIPA1L3-4 | 1 | 0 | 0 | 0 | 5 | coding | 0.752873104 | GPSDFNGLPMGTYQAFPNIYPSQIPATPPSYESVDDINADK | n[230]GPSDFNGLPMGTYQAFPNIYPSQIPATPPSYESVDDINADK | MHNLSVEAPSKILVERYLIEIAKNYNVPYEPDSVVMAEAPSGVETDLIDVGFTDDVKKGGPGRGGGGGFTAPVGGPDGMVPMPMPMPMLSANTPFSYPLPKGPSDFNGLPMGTYQAFPNIYPSQIPATPPSYESVDDINADKNISSAQIVGPGPKPEASAKLPS |
lnc-SIRPA-1:1 | OSCC | 19 | 0.820573 | coding | 95 | chr20 | 1830028 | 1836047 | + | 0.8387 | lnc-SIRPA-1 | 0.58 | -3.82 | -2.76 | -4.493 | 3 | noncoding | -0.341467801 | CLRAPFSLHQGPEAGQGLK | n[145]CLRAPFSLHQGPEAGQGLK | LQQASPESLLCTGLREARQDYTRGWRSWRECMSHARSATTLFYGLHGNRSRNQRVPRSSSHTHFSFSGDKCLRAPFSLHQGPEAGQGLKRLWLNL |
lnc-SIRPG-4:1 | BRCA-Luminal B | 9 | 0.010119 | noncoding | 43 | chr20 | 1721364 | 1727746 | - | 0.9506 | lnc-SIRPG-4 | 0.029 | -4.472 | -1.259 | -5.814 | 1 | noncoding | -0.407792868 | LVFVDLLEK | n[145]LVFVDLLEK | LVFVDLLEKLLCDSGIDLHRYCRLQSEVVHLRISLSPGKRPPM |
lnc-SIRPG-4:1 | OSCC | 9 | 0.010119 | noncoding | 43 | chr20 | 1721364 | 1727746 | - | 0.9416 | lnc-SIRPG-4 | 0.029 | -4.472 | -1.259 | -5.814 | 1 | noncoding | -0.407792868 | LVFVDLLEK | n[145]LVFVDLLEK | LVFVDLLEKLLCDSGIDLHRYCRLQSEVVHLRISLSPGKRPPM |
lnc-SIRPG-4:1 | OV | 9 | 0.010119 | noncoding | 43 | chr20 | 1721364 | 1727746 | - | 0.9931 | lnc-SIRPG-4 | 0.029 | -4.472 | -1.259 | -5.814 | 25 | noncoding | -0.407792868 | LVFVDLLEK | n[145]LVFVDLLEK | LVFVDLLEKLLCDSGIDLHRYCRLQSEVVHLRISLSPGKRPPM |
Page 1 of 1
bottom of page