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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC12A7-5:14 | OV | 9 | 0.888459 | coding | 308 | chr5 | 1170641 | 1182847 | - | 0.2465 | lnc-SLC12A7-5 | 0.098 | 0 | 0 | 0 | 1 | noncoding | -0.258349532 | SLLASMAQR | n[145]SLLASMAQR | LEGPGRGVAWEGWPRSRGQGHFGEVQGAARSHRCGHGRSLLASMAQRKEGLRVRGHGREEGVGQTLSQGHGVGEKQRLRACPDPPPEPAQSGSSPSSLPLHHPGAGAASPWPGDLREVSPQSAVPSGSPGPRVRPDPTVDPESLQLLCPAQEQSSLQGQDWGGARLFRPLDATQLFLPVCWQRTSTASEALKRQGLPLFQKVPEPTMSRQCLGKARGGGRGSEERGILRGYSCAEPRAPQKPQKEKGAPLGASSLHPGCCRVTSRSASRGGPSVWPEKPSHCPVWWMSGPVPCFRRREGVRGSSQTPR |
lnc-SLC12A7-5:14 | OV | 8 | 0.888459 | coding | 96 | chr5 | 1170641 | 1182847 | - | 0.1481 | lnc-SLC12A7-5 | 0.058 | 0 | 0 | 0 | 1 | noncoding | -0.258349532 | VLGMSGLR | n[145]VLGMSGLR | LQEQPWEHGEQLLLPMCSGLRNSGEKKHNPTGPACLSCSLEAPGKAPTAGRGWVPERGCGVSRVLGMSGLRGTPAGRVPLALQDVAGLVCPQLSLT |
lnc-SLC14A1-1:1 | OV | 24 | 0.0705457 | noncoding | 123 | chr18 | 45775267 | 45788586 | + | 0.5927 | lnc-SLC14A1-1 | 0.054 | -3.501 | -3.725 | 0 | 6 | noncoding | -0.313703831 | VAYEAMTQVPQCLGPRFAAWNQRR | n[145]VAYEAMTQVPQCLGPRFAAWNQRR | LGGKKWGEGEGRRTGLLEAGFLPKGRYATVRNITPSPSILRKVAYEAMTQVPQCLGPRFAAWNQRRGAAARGSCAKPKGQPQTRNLTRLAGLMAESPWRRGSSGPVLPGGPGWSPLQSRVSGP |
lnc-SLC14A1-1:1 | OV | 24 | 0.0705457 | noncoding | 123 | chr18 | 45775267 | 45788586 | + | 0.5927 | lnc-SLC14A1-1 | 0.054 | -3.501 | -3.725 | 0 | 6 | noncoding | -0.313703831 | VAYEAMTQVPQCLGPRFAAWNQRR | n[145]VAYEAM[147]TQVPQCLGPRFAAWNQRR | LGGKKWGEGEGRRTGLLEAGFLPKGRYATVRNITPSPSILRKVAYEAMTQVPQCLGPRFAAWNQRRGAAARGSCAKPKGQPQTRNLTRLAGLMAESPWRRGSSGPVLPGGPGWSPLQSRVSGP |
lnc-SLC14A2-3:2 | OV | 16 | 0.0124589 | noncoding | 35 | chr18 | 45168569 | 45169292 | + | 0.5587 | lnc-SLC14A2-3 | 0.422 | -5.689 | -4.474 | -6.709 | 1 | noncoding | -0.562825872 | AWNMMLTSHDETSHMK | n[145]AWNM[147]M[147]LTSHDETSHMK | LFWWKRNFFFYEALRAWNMMLTSHDETSHMKYNFC |
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