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The Maher Lab

McDonnell Genome Institute

Washington University School of Medicine in St. Louis

PepTransDB

The Maher Lab | Washington University

LncRNA Peptides

CircRNA Peptides

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page.

Transcript*	Cancer	Peptide Length	CPC Coding Probability	CPC Label	ORF Length	Chromosome	Start	End	Strand	Max Probability	Gene Name	Conservation Score	PhyloCSF Frame 1	PhyloCSF Frame 2	PhyloCSF Frame 3	No. of Spectra	CNTI Index	CNTI Score	Peptide	Modified Peptide	ORF
lnc-SLC27A2-2:1	LUAD	13	0.119709	noncoding	95	chr15	50466737	50467096	+	0.707	lnc-SLC27A2-2	1	0	0	0	4	noncoding	-0.402706007	QLIDLHILSEIVK	n[230]QLIDLHILSEIVK	MSHSIKSLEKVCADLIRGAKKKNLKVKGPVQMPTKTLRIATRKTPFGDGSKTWDHFHMRIHKQLIDLHILSEIVKQITSISTEPGVEVEVTIGDA
lnc-SLC27A5-3:2	OV	9	0.997767	coding	105	chr19	58468154	58476001	-	0.5536	lnc-SLC27A5-3	1	14.256	-3.96	-4.836	2	coding	0.765414676	AAPQSAHTK	n[145]AAPQSAHTK	MRRWLSSTAPLAKALPQSTQRKGRSPVCRSWCWVRLELWLKARPHCGQAKGFSPVCTRWCLKSEEPWLKAAPQSAHTKGFSPVCVRSCWIRCELRQKRRPHCAQA
lnc-SLC27A5-3:2	OV	9	0.997767	coding	105	chr19	58468154	58476001	-	0.9342	lnc-SLC27A5-3	1	14.256	-3.96	-4.836	13	coding	0.765414676	ALPQSTQRK	n[145]ALPQSTQRK	MRRWLSSTAPLAKALPQSTQRKGRSPVCRSWCWVRLELWLKARPHCGQAKGFSPVCTRWCLKSEEPWLKAAPQSAHTKGFSPVCVRSCWIRCELRQKRRPHCAQA
lnc-SLC28A1-4:1	PRAD	14	0.164008	noncoding	81	chr15	85105692	85108154	+	0.1881	lnc-SLC28A1-4	0.204	-4.452	-3.718	-4.372	1	noncoding	-0.373539265	QAAAGHPYLPLNAR		LERVQCCVSDRRSRCQGCSRDGRRSSCADAVHSWETVRDERQAAAGHPYLPLNARKFFISETLKDFEQGSHRIRVADLTEL
lnc-SLC28A1-4:1	PRAD	15	0.164008	noncoding	81	chr15	85105692	85108154	+	0.9836	lnc-SLC28A1-4	0.204	-4.452	-3.718	-4.372	1	noncoding	-0.373539265	QAAAGHPYLPLNARK		LERVQCCVSDRRSRCQGCSRDGRRSSCADAVHSWETVRDERQAAAGHPYLPLNARKFFISETLKDFEQGSHRIRVADLTEL

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