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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC35C1-8:1 | OV | 9 | 0.129883 | noncoding | 43 | chr11 | 45671918 | 45701020 | + | 0.9642 | lnc-SLC35C1-8 | 0.958 | -5.259 | -5.349 | -4.282 | 3 | noncoding | -0.312209276 | LGQAVETAK | n[145]LGQAVETAK | LGQAVETAKRHIPGWLGASLASCPTSLAIVVKTVKERGLLASK |
lnc-SLC35C1-83:11 | BRCA-HER2-enriched | 13 | 0.025051 | noncoding | 34 | chr11 | 45723308 | 45744250 | + | 0.9967 | lnc-SLC35C1-83 | 0.096 | -4.599 | -4.55 | -4.978 | 4 | noncoding | -0.355716157 | LHLLPSVFPTNTR | n[145]LHLLPSVFPTNTR | LHLLPSVFPTNTRASPLYPIHMPQKLTMTVGLFQ |
lnc-SLC35C1-83:11 | BRCA-Luminal B | 13 | 0.025051 | noncoding | 34 | chr11 | 45723308 | 45744250 | + | 0.9967 | lnc-SLC35C1-83 | 0.096 | -4.599 | -4.55 | -4.978 | 4 | noncoding | -0.355716157 | LHLLPSVFPTNTR | n[145]LHLLPSVFPTNTR | LHLLPSVFPTNTRASPLYPIHMPQKLTMTVGLFQ |
lnc-SLC35C1-83:8 | CCRC | 12 | 0.0592962 | noncoding | 37 | chr11 | 45722411 | 45744254 | + | 0.9969 | lnc-SLC35C1-83 | 0.01 | -5.224 | -4.704 | -4.015 | 6 | noncoding | -0.355716157 | LLLWDTSDLCLK | n[230]LLLWDTSDLCLK | LLLWDTSDLCLKLSHLLSALCLGLCLDGNRSVSCHYW |
lnc-SLC35E3-1:1 | OV | 8 | 0.0214708 | noncoding | 40 | chr12 | 68828117 | 68828553 | + | 0.7546 | lnc-SLC35E3-1 | 0.68 | 0 | 0 | -3.783 | 2 | noncoding | -0.472021347 | FLDFLVNK | n[145]FLDFLVNK | MSKLNTLALFGKKQMSSYILKFGFDRKKFLDFLVNKNFIR |
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