top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC38A4-2:1 | OV | 11 | 0.0329784 | noncoding | 34 | chr12 | 46682070 | 46682713 | - | 0.9775 | lnc-SLC38A4-2 | 1 | -4.86 | -4.599 | -4.331 | 57 | noncoding | -0.343007779 | MAHEGEEAQSK | n[145]M[147]AHEGEEAQSK | MAHEGEEAQSKFRQIISAVQYCHQKKIIHRDPKP |
lnc-SLC38A5-1:2 | BRCA-HER2-enriched | 20 | 0.0493658 | noncoding | 56 | chrX | 48505360 | 48508850 | - | 0.9977 | lnc-SLC38A5-1 | 0.921 | -4.714 | -3.817 | -4.415 | 25 | noncoding | -0.370709911 | LAIQEQTSESPNFQALEMGK | n[145]LAIQEQTSESPNFQALEMGK | LAIQEQTSESPNFQALEMGKQTEISPSPTFERTEVTPNPPTSWDRPGTFISNDCVT |
lnc-SLC38A5-1:2 | BRCA-Basal-like | 20 | 0.0493658 | noncoding | 56 | chrX | 48505360 | 48508850 | - | 0.9977 | lnc-SLC38A5-1 | 0.921 | -4.714 | -3.817 | -4.415 | 25 | noncoding | -0.370709911 | LAIQEQTSESPNFQALEMGK | n[145]LAIQEQTSESPNFQALEMGK | LAIQEQTSESPNFQALEMGKQTEISPSPTFERTEVTPNPPTSWDRPGTFISNDCVT |
lnc-SLC38A5-1:2 | BRCA-Luminal A | 20 | 0.0493658 | noncoding | 56 | chrX | 48505360 | 48508850 | - | 0.9977 | lnc-SLC38A5-1 | 0.921 | -4.714 | -3.817 | -4.415 | 25 | noncoding | -0.370709911 | LAIQEQTSESPNFQALEMGK | n[145]LAIQEQTSESPNFQALEMGK | LAIQEQTSESPNFQALEMGKQTEISPSPTFERTEVTPNPPTSWDRPGTFISNDCVT |
lnc-SLC38A5-1:2 | BRCA-Luminal B | 20 | 0.0493658 | noncoding | 56 | chrX | 48505360 | 48508850 | - | 0.9977 | lnc-SLC38A5-1 | 0.921 | -4.714 | -3.817 | -4.415 | 25 | noncoding | -0.370709911 | LAIQEQTSESPNFQALEMGK | n[145]LAIQEQTSESPNFQALEMGK | LAIQEQTSESPNFQALEMGKQTEISPSPTFERTEVTPNPPTSWDRPGTFISNDCVT |
Page 1 of 1
bottom of page