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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC44A5-1:1 | BRCA-Luminal B | 9 | 0.0368674 | noncoding | 69 | chr1 | 75129973 | 75132576 | - | 0.9966 | lnc-SLC44A5-1 | 0.104 | -4.728 | -1.981 | -4.049 | 4 | noncoding | -0.330308603 | GEAQLEPER | n[145]GEAQLEPER | LGQTCGDRGEAQLEPERKRGQRRRIQDSRAACRRRNRALLLRTRAFPGPRPSPPTSRAPAPRVQWAIGL |
lnc-SLC44A5-4:3 | CCRC | 22 | 0.999483 | coding | 229 | chr1 | 75638166 | 75723036 | - | 0.7237 | lnc-SLC44A5-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.623777337 | FLMFCTTNIFGSLKPMDSFLTK | FLMFCTTNIFGSLKPM[147]DSFLTK | MAKKSKSKPMKEILEWVSLFKYITVVVFEEEVILREPVENWPLCDCLFSLHSKGFPLDKVVAYAKLRNPFVINDLNMQYLIQDWREVYSILQAEVILLPCYAILNRDPNNPKECNLIEGEDHVEVNEEVFQKPFVEKPVSAEDHNVYIYYPTSAGSGSQRLFRKIGSRSSAYSPQSNVQKSSSYTHEEFMPGDDTNVKRFLMFCTTNIFGSLKPMDSFLTKVFLNALNM |
lnc-SLC35F5-14:5 | OV | 8 | 0.110398 | noncoding | 58 | chr2 | 113611238 | 113627138 | - | 0.9617 | lnc-SLC35F5-14 | 0.782 | 0 | 0 | 0 | 1 | coding | 0.706008613 | AGQLEAGR | n[145]AGQLEAGR | LVPSGKAGQLEAGRGLPGHREPTTRFASLRPARRLLHTCRSHAGGLDIEGREVDLGDI |
lnc-SLC35F5-14:5 | OV | 19 | 0.110398 | noncoding | 52 | chr2 | 113611238 | 113627138 | - | 0.6504 | lnc-SLC35F5-14 | 0.782 | 0 | 0 | 0 | 4 | coding | 0.706008613 | NPVLSTQPSRETGDINICK | n[145]NPVLSTQPSRETGDINICK | LSRNQERNPVLSTQPSRETGDINICKMNVGSLGKGGTTRSREGASRSQRAYD |
lnc-SLC35F5-3:13 | OV | 26 | 0.143965 | noncoding | 46 | chr2 | 113872934 | 113889767 | - | 0.3094 | lnc-SLC35F5-3 | 0.015 | 0 | 0 | 0 | 1 | noncoding | -0.341860097 | MGQAWWLTPIIPALRETKVGGSPEVR | n[145]M[147]GQAWWLTPIIPALRETKVGGSPEVR | MGQAWWLTPIIPALRETKVGGSPEVRSLRPARPTRRNPVSTKITKN |
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