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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SH3TC2-DT:29 | OV | 24 | 0.998021 | coding | 302 | chr5 | 149063236 | 149078576 | + | 0.9207 | SH3TC2-DT | 0.472 | 0 | 0 | 0 | 6 | coding | 0.659949288 | LSLFADDMTVYLANPIVSAQNLLK | n[145]LSLFADDM[147]TVYLANPIVSAQNLLK | MDTFLDTYTLPRLNQEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAKFYQRYKGELVPFLLKLFQSIKKERILPNSFYEASIILIPKPGRDTTKKENFRPISPMSIDEKILNKILAKRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINIIQHINRTNDKNHMIISIDAEKAFDKIQQHFMLKTLNKLGIDGTYLKIIRAIYDKPAANIILNGHKLEAFPLKTGTRQGCALSPLLFNIMLEVLARKIRQEKEIKGIQLEKEEVKLSLFADDMTVYLANPIVSAQNLLKLISNFSKVSG |
SH3TC2-DT:35 | OV | 8 | 0.202761 | noncoding | 34 | chr5 | 149063316 | 149071527 | + | 0.8341 | SH3TC2-DT | 1 | -4.99 | -5.282 | -2.851 | 3 | noncoding | -0.356039285 | AENIPEIK | n[145]AENIPEIK | LGRRAENIPEIKTALLAPSPTDLAHTDWPATPLQ |
SH3TC2-DT:35 | OV | 9 | 0.202761 | noncoding | 34 | chr5 | 149063316 | 149071527 | + | 0.2265 | SH3TC2-DT | 1 | -4.99 | -5.282 | -2.851 | 1 | noncoding | -0.356039285 | RAENIPEIK | n[145]RAENIPEIK | LGRRAENIPEIKTALLAPSPTDLAHTDWPATPLQ |
SH3TC2-DT:38 | OSCC | 13 | 0.210997 | noncoding | 99 | chr5 | 149063454 | 149109787 | + | 0.7084 | SH3TC2-DT | 0.155 | 0 | 0 | 0 | 2 | noncoding | -0.326140194 | KVSSICPLQGLGR | n[145]KVSSICPLQGLGR | LGNMQTPSCWCAGKESRRSPDEAQHFTEQSGERTLVRGPKNRRCEPREGPARPMLQAIWRLNLRKTDVSFLKKVSSICPLQGLGRKSIHFPRCLPLTYL |
SIRPG-AS1:1 | BRCA-Basal-like | 19 | 0.0522708 | noncoding | 61 | chr20 | 1633507 | 1648472 | + | 0.9956 | SIRPG-AS1 | 0.136 | 0 | 0 | 0 | 1 | noncoding | -0.362138518 | TELAVDMITRLPYISDYRR | n[145]TELAVDM[147]ITRLPYISDYRR | MTELAVDMITRLPYISDYRRYFLPSISYIYSSSRQGHGKIRDLALTQQIRLTTISTVFERK |
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