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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC50A1-2:1 | EOGC | 14 | 0.11937 | noncoding | 90 | chr1 | 155148543 | 155148813 | + | 0.718 | lnc-SLC50A1-2 | 1 | 0 | 0 | 0 | 23 | coding | 0.662442353 | TDQEQKAEGAGDAR | n[145]TDQEQKAEGAGDAR | MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKADAGKEGNNPAENGDAKTDQEQKAEGAGDAR |
lnc-SLC50A1-2:1 | HCC | 18 | 0.11937 | noncoding | 90 | chr1 | 155148543 | 155148813 | + | 1 | lnc-SLC50A1-2 | 1 | 0 | 0 | 0 | 9 | coding | 0.662442353 | EGNNPAENGDAKTDQEQK | n[230]EGNNPAENGDAKTDQEQK | MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKADAGKEGNNPAENGDAKTDQEQKAEGAGDAR |
lnc-SLC51A-13:1 | PRAD | 17 | 0.97999 | coding | 65 | chr3 | 195998862 | 196005093 | + | 0.318 | lnc-SLC51A-13 | 0.023 | 0 | 0 | 0 | 1 | noncoding | -0.265932067 | VEHQLLPESPPERPSMR | VEHQLLPESPPERPSM[147]R | LHDPQSRTSAPLRVCSCKNLRVEHQLLPESPPERPSMRTTSAPPRVLHCMTLKLQHQLLAESSAT |
lnc-SLC51A-13:1 | PRAD | 8 | 0.97999 | coding | 65 | chr3 | 195998862 | 196005093 | + | 0.797 | lnc-SLC51A-13 | 0.023 | 0 | 0 | 0 | 1 | noncoding | -0.265932067 | VLHCMTLK | VLHCM[147]TLK | LHDPQSRTSAPLRVCSCKNLRVEHQLLPESPPERPSMRTTSAPPRVLHCMTLKLQHQLLAESSAT |
lnc-SLC51A-14:1 | EOGC | 12 | 0.0485932 | noncoding | 40 | chr3 | 195721270 | 195734314 | + | 0.9983 | lnc-SLC51A-14 | 0.29 | 0 | 0 | 0 | 32 | noncoding | -0.35396456 | LILYNTCFYELK | n[145]LILYNTCFYELK | LILYNTCFYELKVGAMYTLDEDHDWDVFVQVGKILLKPTG |
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