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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC47A2-2:6 | HCC | 7 | 0.200781 | noncoding | 77 | chr17 | 19640426 | 19647149 | - | 0.9999 | lnc-SLC47A2-2 | 0.375 | 0 | -4.313 | -4.514 | 19 | noncoding | -0.353003933 | EIHDEAR | n[230]EIHDEAR | MNEWYTLTYSSLSVLALSTFVAFSTACNLKLKEIHDEARKLARPSNSSSLLLLACLLWTKTKKSSPCGNTIVKVGRQ |
lnc-SLC47A2-2:9 | OV | 10 | 0.0715868 | noncoding | 70 | chr17 | 19560110 | 19597922 | - | 0.9755 | lnc-SLC47A2-2 | 1 | -3.522 | -3.082 | 6.689 | 11 | noncoding | -0.333246569 | ETPGNMHMVK | n[145]ETPGNM[147]HMVK | MDGGKSPVNLKAPHRAQRETPGNMHMVKKWNNMNKIVSKVLLQCPSSLPQYQPCLLQISHFKKILALTGR |
lnc-SLC47A2-2:9 | OV | 10 | 0.0715868 | noncoding | 70 | chr17 | 19560110 | 19597922 | - | 0.9755 | lnc-SLC47A2-2 | 1 | -3.522 | -3.082 | 6.689 | 11 | noncoding | -0.333246569 | ETPGNMHMVK | n[145]ETPGNMHMVK | MDGGKSPVNLKAPHRAQRETPGNMHMVKKWNNMNKIVSKVLLQCPSSLPQYQPCLLQISHFKKILALTGR |
lnc-SLC48A1-23:6 | OV | 16 | 0.0195024 | noncoding | 59 | chr12 | 47719157 | 47729203 | + | 0.994 | lnc-SLC48A1-23 | 0.349 | -4.66 | -4.326 | -2.822 | 23 | noncoding | -0.334188522 | DTCPGQPILPSSFSCK | n[145]DTCPGQPILPSSFSCK | LTQRTTKRDTCPGQPILPSSFSCKTKATSFQQRTCVWKDPAAGPSQERPRLTSQGDPGT |
lnc-SLC48A1-5:1 | CCRC | 16 | 0.150801 | noncoding | 71 | chr12 | 47593207 | 47593440 | + | 0.9982 | lnc-SLC48A1-5 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.333498636 | TITLEVKPSDTIENVK | n[230]TITLEVKPSDTIENVK | MQNFVNTLTGKTITLEVKPSDTIENVKAKIQDKDGLLPDQQRLIFARNNWKMSTPSDYDIPKGPLGTCFCT |
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