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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLCO4A1-4:1 | EOGC | 16 | 0.545135 | coding | 66 | chr20 | 62724422 | 62732056 | + | 0.9986 | lnc-SLCO4A1-4 | 0.034 | 0 | 0 | 0 | 3 | noncoding | -0.286837999 | LSVIGITPHLESQQTK | n[145]LSVIGITPHLESQQTK | LSVIGITPHLESQQTKRREEDGGRGRRREVEEGGGWRSEGEGGGGRLAVPRITQPRKSVERWPALA |
lnc-SLC44A5-4:3 | CCRC | 20 | 0.999483 | coding | 229 | chr1 | 75638166 | 75723036 | - | 0.4283 | lnc-SLC44A5-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.623777337 | LRNPFVINDLNMQYLIQDWR | n[230]LRNPFVINDLNM[147]QYLIQDWR | MAKKSKSKPMKEILEWVSLFKYITVVVFEEEVILREPVENWPLCDCLFSLHSKGFPLDKVVAYAKLRNPFVINDLNMQYLIQDWREVYSILQAEVILLPCYAILNRDPNNPKECNLIEGEDHVEVNEEVFQKPFVEKPVSAEDHNVYIYYPTSAGSGSQRLFRKIGSRSSAYSPQSNVQKSSSYTHEEFMPGDDTNVKRFLMFCTTNIFGSLKPMDSFLTKVFLNALNM |
lnc-SLC44A5-4:3 | OV | 11 | 0.999483 | coding | 71 | chr1 | 75638166 | 75723036 | - | 0.6624 | lnc-SLC44A5-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.623777337 | LSQTCVSANIR | n[145]LSQTCVSANIR | LISTMKQWYLRTKEHLPKVIIISSDCISRNKLSQTCVSANIRRMLSSDAIYLQAVLIYITSIISTSNKIKN |
lnc-SLC44A5-4:3 | OV | 7 | 0.999483 | coding | 71 | chr1 | 75638166 | 75723036 | - | 0.4616 | lnc-SLC44A5-4 | 1 | 0 | 0 | 0 | 2 | coding | 0.623777337 | TKEHLPK | n[145]TKEHLPK | LISTMKQWYLRTKEHLPKVIIISSDCISRNKLSQTCVSANIRRMLSSDAIYLQAVLIYITSIISTSNKIKN |
lnc-SLC45A1-1:6 | PRAD | 11 | 0.0442108 | noncoding | 109 | chr1 | 8423457 | 8435011 | + | 0.466 | lnc-SLC45A1-1 | 0.173 | 0 | 0 | 0 | 1 | noncoding | -0.33928045 | FILHFMEFPVR | LPSLSSLWPYFCQLQQSSRRSAWRALCPFPLLPSVTMPSRFILHFMEFPVRHAPRFLQGLCQLQGHVMPVTALVSSLASVCLHTPPPNIPVLGILYINVFSYLKTCDNS |
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