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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC9C1-2:1 | OV | 20 | 0.122214 | noncoding | 52 | chr3 | 112387484 | 112409279 | - | 0.9841 | lnc-SLC9C1-2 | 0.257 | -4.936 | -5.317 | -5.215 | 5 | noncoding | -0.350340618 | ITLFGAMNVYYVTLGFGGMK | n[145]ITLFGAMNVYYVTLGFGGM[147]K | LIFLKRKNRAFFFSFHNFGKSKITLFGAMNVYYVTLGFGGMKIYCITLGMLI |
lnc-SLCO3A1-2:2 | OV | 33 | 0.101086 | noncoding | 54 | chr15 | 92447222 | 92449006 | + | 0.6129 | lnc-SLCO3A1-2 | 0.4 | -4.494 | -5.34 | -4.795 | 1 | noncoding | -0.327803269 | CEMPVTNVYPTTLLTSQLGVRPYTQLPIQPHGR | n[145]CEM[147]PVTNVYPTTLLTSQLGVRPYTQLPIQPHGR | MHVWGHCGREFFLEHTKCEMPVTNVYPTTLLTSQLGVRPYTQLPIQPHGRSPGM |
lnc-SLCO3A1-2:2 | OV | 8 | 0.101086 | noncoding | 54 | chr15 | 92447222 | 92449006 | + | 0.7986 | lnc-SLCO3A1-2 | 0.4 | -4.494 | -5.34 | -4.795 | 3 | noncoding | -0.327803269 | EFFLEHTK | n[145]EFFLEHTK | MHVWGHCGREFFLEHTKCEMPVTNVYPTTLLTSQLGVRPYTQLPIQPHGRSPGM |
lnc-SLCO3A1-2:2 | OV | 19 | 0.101086 | noncoding | 68 | chr15 | 92447222 | 92449006 | + | 0.9184 | lnc-SLCO3A1-2 | 1 | -3.679 | -4.755 | -4.045 | 2 | noncoding | -0.327803269 | KLMQPDLFPAITDSLSSVK | n[145]KLMQPDLFPAITDSLSSVK | MVLESLGIRGETLPFVKERKCPLNGEWATTWKKLMQPDLFPAITDSLSSVKTALSTSNKPFKQTGCSS |
lnc-SLCO4A1-4:1 | BRCA-Basal-like | 8 | 0.545135 | coding | 165 | chr20 | 62724422 | 62732056 | + | 0.9991 | lnc-SLCO4A1-4 | 0.208 | -4.011 | -3.63 | -3.836 | 7 | noncoding | -0.286837999 | AGQHPEAK | n[145]AGQHPEAK | LVMNRQTSPQEGTELPFPAPASFPGIFTVQFLKMAEVHFLTSPWQGCFHFGESGGRLWFSLPAGGWATVSAEDAVCTAGLSLCVPALLRKGKEKETESRRAGQHPEAKQVSRQPLLPNARGTSTRSPGQPSQVPTQFLSPAPRTGPQWSPRSRQRGFRTLRRVLG |
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