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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SGMS1-AS1:2 | OSCC | 15 | 0.192998 | noncoding | 60 | chr10 | 50624950 | 50641451 | + | 0.9197 | SGMS1-AS1 | 0.2 | -4.4 | -5.462 | -5.537 | 52 | noncoding | -0.323709143 | GSQVQTMNPNGRAAR | n[145]GSQVQTM[147]NPNGRAAR | LGRCNYKQPNKGSQVQTMNPNGRAARHERPCCPSTPQYFTSGSLDNSREYLQNPAPTQNF |
SGMS1-AS1:2 | OSCC | 15 | 0.192998 | noncoding | 60 | chr10 | 50624950 | 50641451 | + | 0.9197 | SGMS1-AS1 | 0.2 | -4.4 | -5.462 | -5.537 | 52 | noncoding | -0.323709143 | GSQVQTMNPNGRAAR | n[145]GSQVQTMNPNGRAAR | LGRCNYKQPNKGSQVQTMNPNGRAARHERPCCPSTPQYFTSGSLDNSREYLQNPAPTQNF |
SH3PXD2A-AS1:2 | HCC | 12 | 0.0447874 | noncoding | 55 | chr10 | 103746778 | 103755409 | + | 0.9975 | SH3PXD2A-AS1 | 0.053 | -4.657 | -4.686 | -3.45 | 62 | noncoding | -0.326277254 | SWGRPSVCISNK | n[230]SWGRPSVCISNK | LMDLQTLLLQLYGAHKSPVHVKMQTVTYRSWGRPSVCISNKLPDDGHTADLRTTF |
SH3PXD2A-AS1:2 | LUAD | 12 | 0.0447874 | noncoding | 55 | chr10 | 103746778 | 103755409 | + | 0.9993 | SH3PXD2A-AS1 | 0.053 | -4.657 | -4.686 | -3.45 | 19 | noncoding | -0.326277254 | SWGRPSVCISNK | n[230]SWGRPSVCISNK | LMDLQTLLLQLYGAHKSPVHVKMQTVTYRSWGRPSVCISNKLPDDGHTADLRTTF |
SH3RF3-AS1:1 | OV | 22 | 0.911322 | coding | 339 | chr2 | 109127327 | 109130119 | - | 0.0504 | SH3RF3-AS1 | 1 | -1.031 | 10.946 | 1.697 | 1 | coding | 0.807602104 | MPSSSRTSKMLAGSSSTPQPTR | n[145]MPSSSRTSKMLAGSSSTPQPTR | MPSSSRTSKMLAGSSSTPQPTRMRHSGQRSSWREHTMLSRQRRQKVCWHGSTLAVVSRRSRHTEHSSRSSSDDSSMSSPAPAAVAAARRRRRSPGLSSSPSLCAAAAAALDAHSQDAPSSMGEAPAAVSRGCLGPGAGVEPATGSQHQDWGAGLRRDFLHPGWWPDARAVAVRSGSPTGLRGGDRPAWRGPASRARPVLSAAPAAAGYTCPAASPPRAGDRGCCRARSSTGSVLQAAARAWETSGRKCGQRPARSPGRPGRGVHAPPRSWRAAPPPRHLHAPLACSLVAVLQRIQQDRSSSSAASTCAGVRAEVTVTAGLREGGAVPAGLPFAWAQAGD |
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