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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLC6A18-2:1 | BRCA-Luminal B | 9 | 0.179597 | noncoding | 43 | chr5 | 1345193 | 1350909 | + | 0.9953 | lnc-SLC6A18-2 | 0.022 | 0 | 0 | 0 | 7 | noncoding | -0.31434672 | FQLQLSNIR | n[145]FQLQLSNIR | MKAVDLWSAGGKFQLQLSNIRGLVGSPGWIVSRHPEAGTEAGT |
lnc-SLC6A18-2:1 | BRCA-HER2-enriched | 9 | 0.179597 | noncoding | 43 | chr5 | 1345193 | 1350909 | + | 0.9953 | lnc-SLC6A18-2 | 0.022 | 0 | 0 | 0 | 7 | noncoding | -0.31434672 | FQLQLSNIR | n[145]FQLQLSNIR | MKAVDLWSAGGKFQLQLSNIRGLVGSPGWIVSRHPEAGTEAGT |
lnc-SLC6A18-2:1 | BRCA-Luminal A | 9 | 0.179597 | noncoding | 43 | chr5 | 1345193 | 1350909 | + | 0.9953 | lnc-SLC6A18-2 | 0.022 | 0 | 0 | 0 | 7 | noncoding | -0.31434672 | FQLQLSNIR | n[145]FQLQLSNIR | MKAVDLWSAGGKFQLQLSNIRGLVGSPGWIVSRHPEAGTEAGT |
lnc-SLC6A18-6:3 | OV | 11 | 0.026913 | noncoding | 142 | chr5 | 1490615 | 1492735 | + | 0.9068 | lnc-SLC6A18-6 | 0.032 | 0 | 0 | 0 | 15 | noncoding | -0.368079548 | VEISEVVYNGK | n[145]VEISEVVYNGK | LWLSVGSLWSFLCLESFCFFTIPVLFHPCSLVIPNSAKKDDIGREEWRSRLAGWRTRQRNGPDCVVFRCPLFWPKRPMVVPGHTGSGDATLPPSQSCQLVCFVNRVEISEVVYNGKEQNSDVGAFHTQMGPGVNVGGAGGGL |
lnc-SLC6A18-6:3 | PRAD | 10 | 0.026913 | noncoding | 142 | chr5 | 1490615 | 1492735 | + | 0.37 | lnc-SLC6A18-6 | 0.032 | 0 | 0 | 0 | 1 | noncoding | -0.368079548 | KDDIGREEWR | LWLSVGSLWSFLCLESFCFFTIPVLFHPCSLVIPNSAKKDDIGREEWRSRLAGWRTRQRNGPDCVVFRCPLFWPKRPMVVPGHTGSGDATLPPSQSCQLVCFVNRVEISEVVYNGKEQNSDVGAFHTQMGPGVNVGGAGGGL |
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