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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLIT2-1:5 | BRCA-Luminal B | 7 | 0.132143 | noncoding | 51 | chr4 | 19455429 | 19580707 | + | 0.9996 | lnc-SLIT2-1 | 0.129 | 0 | 0 | 0 | 3 | noncoding | -0.333795018 | SDGFISK | n[145]SDGFISK | MRSDGFISKCLAFPPTPLSCRPVKKVLVSLSPSAMIVSFLRPPQACGTVSQ |
lnc-SLIT2-1:5 | EOGC | 15 | 0.132143 | noncoding | 51 | chr4 | 19455429 | 19580707 | + | 0.9988 | lnc-SLIT2-1 | 1 | -5.464 | -4.985 | -4.304 | 7 | noncoding | -0.333795018 | SFISSLGGIGIHLSR | n[145]SFISSLGGIGIHLSR | LHKLYAFYLVRFSGIPAEYGSYERSFISSLGGIGIHLSRGDMDPDSTEWPH |
lnc-SLITRK1-7:1 | PRAD | 11 | 0.779717 | coding | 41 | chr13 | 82754658 | 82761127 | - | 0.1873 | lnc-SLITRK1-7 | 0.274 | 0 | 0 | 0 | 4 | noncoding | -0.362337286 | EGAAQAANPGK | MQQHLCRKEGAAQAANPGKGVQQIPRNMPGMEWRLHCFTTS | |
lnc-SLITRK1-7:1 | PRAD | 12 | 0.779717 | coding | 41 | chr13 | 82754658 | 82761127 | - | 0.9765 | lnc-SLITRK1-7 | 0.274 | 0 | 0 | 0 | 2 | noncoding | -0.362337286 | KEGAAQAANPGK | MQQHLCRKEGAAQAANPGKGVQQIPRNMPGMEWRLHCFTTS | |
lnc-SLITRK1-8:4 | CRC | 13 | 0.11874 | noncoding | 91 | chr13 | 82976973 | 83102380 | - | 0.6962 | lnc-SLITRK1-8 | 0.845 | -5.641 | -3.199 | -5.58 | 1 | noncoding | -0.329264279 | INLAKADIIAWLR | MSKNVTLKKIIIKKLKIFNDRLRINLAKADIIAWLRFCRTTVLIENLIEVICNSEEVTISSRISLTFSEKCHCLWKYNIIEKVSLNLWEEL |
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