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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLF1-10:2 | LUAD | 14 | 0.355712 | noncoding | 99 | chr5 | 94111730 | 94118006 | + | 0.9961 | lnc-SLF1-10 | 0.592 | 0 | 0 | 0 | 20 | coding | 0.648087486 | DLVPCIPATPAITK | n[230]DLVPCIPATPAITK | LAAEICITNEEMNVNHQDNGENVSRACHRPLWQPLPPQAQRFRRKKWFRGRGPGSLCCVQSRDLVPCIPATPAITKKDQGAAWAFASEGRSPQALAAST |
lnc-SLF1-4:2 | CCRC | 12 | 0.999977 | coding | 275 | chr5 | 94592770 | 94594791 | + | 0.7491 | lnc-SLF1-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.525845817 | YHYQPLLESFVK | n[230]YHYQPLLESFVK | LVTNMLRLRAICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQKQKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFAGEAHDPLVEALVTEAWGRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTTDSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELTNE |
lnc-SLF1-4:2 | EOGC | 14 | 0.999977 | coding | 160 | chr5 | 94592770 | 94594791 | + | 0.5277 | lnc-SLF1-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.525845817 | GIAGMNVAQQQIYK | n[145]GIAGMNVAQQQIYK | LDSQLEILSSSLSARVQFCLMELNRSVCLECPEFQIPWFLDCFCQQYNKGIAGMNVAQQQIYKMLAEVLGGINCVKASVLTPYYHTVDFECILEERKKSLLYGSHNITLGQLPEMPWESNTEIVGSRLPPGAERIALEFLDSKAFCRNILHIKGKSSMKK |
lnc-SLF1-4:2 | EOGC | 8 | 0.999977 | coding | 160 | chr5 | 94592770 | 94594791 | + | 0.1282 | lnc-SLF1-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.525845817 | NILHIKGK | n[145]NILHIKGK | LDSQLEILSSSLSARVQFCLMELNRSVCLECPEFQIPWFLDCFCQQYNKGIAGMNVAQQQIYKMLAEVLGGINCVKASVLTPYYHTVDFECILEERKKSLLYGSHNITLGQLPEMPWESNTEIVGSRLPPGAERIALEFLDSKAFCRNILHIKGKSSMKK |
lnc-SLFN12-5:1 | EOGC | 15 | 0.0357318 | noncoding | 61 | chr17 | 35367265 | 35373620 | - | 0.1501 | lnc-SLFN12-5 | 0.192 | -4.021 | -4.534 | -5.447 | 1 | noncoding | -0.441205449 | KELEIELPKPFLPAK | n[145]KELEIELPKPFLPAK | MGQYLYLTKNVQVMLIIIPLILRKELEIELPKPFLPAKESKQMVGLLFKYNCQPKTIIYWL |
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